RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 REC114Q7Z4M0 266 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 WDR5BQ86VZ2 330 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 FAM228AQ86W67 206 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 DGKHQ86XP1 1220 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 ITPRIPQ8IWB1 547 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 FAM3CQ92520 227 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 ZNF707Q96C28 371 aaPredicted RBP6.62□□□□□ -1.35
NCL-208ENST00000466274 ZBTB10Q96DT7 871 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 GPATCH3Q96I76 525 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 LRIG1Q96JA1 1093 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 C20orf173Q96LM9 149 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 BBC3Q96PG8 261 aaPredicted RBP6.62□□□□□ -1.35
NCL-208ENST00000466274 FAM193BQ96PV7 902 aaPredicted RBP6.62□□□□□ -1.35
NCL-208ENST00000466274 RPS6KC1Q96S38 1066 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 HNRNPABQ99729 332 aaKnown RBP6.62□□□□□ -1.35
NCL-208ENST00000466274 KAT14Q9H8E8 782 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 CNOT6Q9ULM6 557 aaKnown RBP6.62□□□□□ -1.35
NCL-208ENST00000466274 RAI2Q9Y5P3 530 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 LCTP09848 1927 aa6.62□□□□□ -1.35
NCL-208ENST00000466274 HELZ2Q9BYK8 2649 aaKnown RBP6.62□□□□□ -1.35
NCL-208ENST00000466274 IGF2RP11717 2491 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 FANCMQ8IYD8 2048 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 GSTTP1A0A1W2PQM5 241 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 SLC22A31A6NKX4 558 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 CYSRT1A8MQ03 144 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 J3QKU1 62 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 RGS13O14921 159 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 TEX28O15482 410 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 MAFGO15525 162 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 ARHGAP6O43182 974 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 ECI2O75521 394 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 RPP40O75818 363 aaKnown RBP6.61□□□□□ -1.35
NCL-208ENST00000466274 UBOX5O94941 541 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 NTRK1P04629 796 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 FGRP09769 529 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 PARP1P09874 1014 aaKnown RBP6.61□□□□□ -1.35
NCL-208ENST00000466274 CCDC192P0DO97 292 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 PCP11498 1178 aaKnown RBP6.61□□□□□ -1.35
NCL-208ENST00000466274 PLA2G2AP14555 144 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 BMP7P18075 431 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 GARTP22102 1010 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 STAT5BP51692 787 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 MRPS9P82933 396 aaKnown RBP6.61□□□□□ -1.35
NCL-208ENST00000466274 SATB1Q01826 763 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 CREMQ03060 361 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 SRSF5Q13243 272 aaKnown RBP6.61□□□□□ -1.35
NCL-208ENST00000466274 MPP2Q14168 576 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 KIZQ2M2Z5 673 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 ARSHQ5FYA8 562 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 NOMO2Q5JPE7 1267 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 LARP1BQ659C4 914 aaKnown RBP6.61□□□□□ -1.35
NCL-208ENST00000466274 HEATR6Q6AI08 1181 aaKnown RBP6.61□□□□□ -1.35
NCL-208ENST00000466274 KIAA1211LQ6NV74 962 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 TMEM173Q86WV6 379 aaPredicted RBP6.61□□□□□ -1.35
NCL-208ENST00000466274 TRMT2AQ8IZ69 625 aaKnown RBP6.61□□□□□ -1.35
NCL-208ENST00000466274 KIAA0319LQ8IZA0 1049 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 ST13P5Q8NFI4 369 aaPredicted RBP6.61□□□□□ -1.35
NCL-208ENST00000466274 HNRNPLLQ8WVV9 542 aaKnown RBP6.61□□□□□ -1.35
NCL-208ENST00000466274 FGF13Q92913 245 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 GPRASP2Q96D09 838 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 HDAC8Q9BY41 377 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 FOXP3Q9BZS1 431 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 CPVLQ9H3G5 476 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 JMJD4Q9H9V9 463 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 HEBP1Q9NRV9 189 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.61□□□□□ -1.35
NCL-208ENST00000466274 ECHDC1Q9NTX5 307 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 VTI1BQ9UEU0 232 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 ZMYM5Q9UJ78 669 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 CACNA1IQ9P0X4 2223 aa6.61□□□□□ -1.35
NCL-208ENST00000466274 NAV2Q8IVL1 2488 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 DSPP15924 2871 aaKnown RBP6.6□□□□□ -1.35
NCL-208ENST00000466274 CNOT1A5YKK6 2376 aaKnown RBP6.6□□□□□ -1.35
NCL-208ENST00000466274 SMG1Q96Q15 3661 aaKnown RBP6.6□□□□□ -1.35
NCL-208ENST00000466274 FAM221BA6H8Z2 402 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 ZBTB5O15062 677 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 ANP32CO43423 234 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 HBP1O60381 514 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 AKAP3O75969 853 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 RHOBTB1O94844 696 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 SOD2P04179 222 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 HNRNPA1P09651 372 aaKnown RBP eCLIP6.6□□□□□ -1.35
NCL-208ENST00000466274 TMOD1P28289 359 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 PWP1Q13610 501 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 SSPNQ14714 243 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 ZNF484Q5JVG2 852 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 ADGRF1Q5T601 910 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 RNF111Q6ZNA4 994 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 TMC3Q7Z5M5 1100 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 GRASPQ7Z6J2 395 aaPredicted RBP6.6□□□□□ -1.35
NCL-208ENST00000466274 IQCA1Q86XH1 822 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 HOMEZQ8IX15 550 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 TMEFF1Q8IYR6 380 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 LSM14AQ8ND56 463 aaKnown RBP6.6□□□□□ -1.35
NCL-208ENST00000466274 ENOX1Q8TC92 643 aaKnown RBP6.6□□□□□ -1.35
NCL-208ENST00000466274 URGCPQ8TCY9 931 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 TRAPPC12Q8WVT3 735 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 GAB3Q8WWW8 586 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 CUL5Q93034 780 aa6.6□□□□□ -1.35
NCL-208ENST00000466274 TCTN2Q96GX1 697 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms