RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 TMEM221A6NGB7 291 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 M0R296 226 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 GABRDO14764 452 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 PAPLNO95428 1278 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 PDGFBP01127 241 aaPredicted RBP10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 POU2F2P09086 479 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 HAPLN1P10915 354 aaPredicted RBP10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 BMP6P22004 513 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 BDNFP23560 247 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 GNL1P36915 607 aaPredicted RBP10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 TUFMP49411 452 aaKnown RBP10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 MXI1P50539 228 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 FKBP3Q00688 224 aaKnown RBP10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 LRRC63Q05C16 580 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 SIGLEC14Q08ET2 396 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 IFRD2Q12894 506 aaPredicted RBP10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 TDGQ13569 410 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 NFE2Q16621 373 aaPredicted RBP10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 COBLL1Q53SF7 1204 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 PRSS36Q5K4E3 855 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 STXBP5Q5T5C0 1151 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 TRIM67Q6ZTA4 783 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 RTL10Q7L3V2 364 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 DNAJB7Q7Z6W7 309 aaPredicted RBP10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 TMC8Q8IU68 726 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 CREBRFQ8IUR6 639 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 TAS1R2Q8TE23 839 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 RPP25Q9BUL9 199 aaKnown RBP10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 ATXN3LQ9H3M9 355 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 CRTAC1Q9NQ79 661 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 IGSF9Q9P2J2 1179 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 EPS15L1Q9UBC2 864 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 MAGEC2Q9UBF1 373 aaPredicted RBP10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 FBXL21Q9UKT6 434 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 CDH9Q9ULB4 789 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 CA14Q9ULX7 337 aa10.4□□□□□ -0.74
RTFDC1-205ENST00000466260 PATJQ8NI35 1801 aa10.4□□□□□ -0.75
RTFDC1-205ENST00000466260 CUL9Q8IWT3 2517 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 PPP1R3GB7ZBB8 358 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 CLDN5O00501 218 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 DPYSL4O14531 572 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 ZNF197O14709 1029 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 MAPK13O15264 365 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 MOSPD3O75425 235 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 CD58P19256 250 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 GRIK1P39086 918 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 PPP1R2P41236 205 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 NOP14P78316 857 aaKnown RBP10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 CLDN10P78369 228 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 PAK1Q13153 545 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 HTR4Q13639 388 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 GRM2Q14416 872 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 SGSM1Q2NKQ1 1148 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 C4orf50Q6ZRC1 276 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 HFE2Q6ZVN8 426 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 ITIH5Q86UX2 942 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 ELOA2Q8IYF1 753 aaPredicted RBP10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 CCDC150Q8NCX0 1101 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 TTC16Q8NEE8 873 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 SHKBP1Q8TBC3 707 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 C2orf15Q8WU43 125 aaKnown RBP10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 PSMG2Q969U7 264 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 PBXIP1Q96AQ6 731 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 PCED1BQ96HM7 432 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 DHTKD1Q96HY7 919 aaPredicted RBP10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 GCNAQ96QF7 691 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 PKMYT1Q99640 499 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 MED10Q9BTT4 135 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 MKNK1Q9BUB5 465 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 NUP62CLQ9H1M0 184 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 MFSD1Q9H3U5 465 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 CLSTN2Q9H4D0 955 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 TMEM8AQ9HCN3 771 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 KIAA1468Q9P260 1216 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 HMGXB4Q9UGU5 601 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 MAFFQ9ULX9 164 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 DUSP12Q9UNI6 340 aa10.39□□□□□ -0.75
RTFDC1-205ENST00000466260 BICDL2A1A5D9 508 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 PRR33A8MZF0 331 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 IKBKBO14920 756 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 SLC16A3O15427 465 aaKnown RBP10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 GPR37L1O60883 481 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 TACC1O75410 805 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 STAU1O95793 577 aaKnown RBP10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 ASS1P00966 412 aaKnown RBP10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 P4HA1P13674 534 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 RFX1P22670 979 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 ANXA13P27216 316 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 ASPAP45381 313 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 SMARCB1Q12824 385 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 LRMPQ12912 555 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 CBWD6Q4V339 395 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 ZNF394Q53GI3 561 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 CBWD3Q5JTY5 395 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 CBWD5Q5RIA9 395 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 GPR158Q5T848 1215 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 KRT39Q6A163 491 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 TTI2Q6NXR4 508 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 MTSS1LQ765P7 747 aa10.38□□□□□ -0.75
RTFDC1-205ENST00000466260 ACOT1Q86TX2 421 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms