RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 ECT2Q9H8V3 914 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 EBF1Q9UH73 591 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 ZMIZ1Q9ULJ6 1067 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 PCDH15Q96QU1 1955 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 ACACAQ13085 2346 aa12.7□□□□□ -0.38
CNOT4-208ENST00000465721 VWA3AA6NCI4 1184 aa12.69□□□□□ -0.38
CNOT4-208ENST00000465721 C4orf47A7E2U8 309 aa12.69□□□□□ -0.38
CNOT4-208ENST00000465721 ANKRD63C9JTQ0 380 aa12.69□□□□□ -0.38
CNOT4-208ENST00000465721 NOL4O94818 638 aa12.69□□□□□ -0.38
CNOT4-208ENST00000465721 RHOBTB1O94844 696 aa12.69□□□□□ -0.38
CNOT4-208ENST00000465721 AMPD2Q01433 879 aa12.69□□□□□ -0.38
CNOT4-208ENST00000465721 SDHAF4Q5VUM1 108 aa12.69□□□□□ -0.38
CNOT4-208ENST00000465721 METTL23Q86XA0 190 aa12.69□□□□□ -0.38
CNOT4-208ENST00000465721 DCP1BQ8IZD4 617 aaKnown RBP12.69□□□□□ -0.38
CNOT4-208ENST00000465721 THEM5Q8N1Q8 247 aa12.69□□□□□ -0.38
CNOT4-208ENST00000465721 LEO1Q8WVC0 666 aaPredicted RBP12.69□□□□□ -0.38
CNOT4-208ENST00000465721 MRPS31Q92665 395 aaKnown RBP12.69□□□□□ -0.38
CNOT4-208ENST00000465721 CD101Q93033 1021 aa12.69□□□□□ -0.38
CNOT4-208ENST00000465721 TRMT2BQ96GJ1 504 aaKnown RBP12.69□□□□□ -0.38
CNOT4-208ENST00000465721 CDK5RAP3Q96JB5 506 aa12.69□□□□□ -0.38
CNOT4-208ENST00000465721 PARVGQ9HBI0 331 aa12.69□□□□□ -0.38
CNOT4-208ENST00000465721 DPP3Q9NY33 737 aa12.69□□□□□ -0.38
CNOT4-208ENST00000465721 PCDHB5Q9Y5E4 795 aa12.69□□□□□ -0.38
CNOT4-208ENST00000465721 IGSF10Q6WRI0 2623 aa12.69□□□□□ -0.38
CNOT4-208ENST00000465721 TRAK2O60296 914 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 FAM13AO94988 1023 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 SEC24BO95487 1268 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 TOP3BO95985 862 aaKnown RBP12.68□□□□□ -0.38
CNOT4-208ENST00000465721 CSH1P0DML2 217 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 CSH2P0DML3 217 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 SPINK2P20155 84 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 GTF2BQ00403 316 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 FAM160A1Q05DH4 1040 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 FOXC1Q12948 553 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 EML3Q32P44 896 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 SV2CQ496J9 727 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 RILPL1Q5EBL4 403 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 SH3PXD2AQ5TCZ1 1133 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 CC2D1AQ6P1N0 951 aaPredicted RBP12.68□□□□□ -0.38
CNOT4-208ENST00000465721 CRELD2Q6UXH1 353 aaPredicted RBP12.68□□□□□ -0.38
CNOT4-208ENST00000465721 RASSF3Q86WH2 238 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 MYCT1Q8N699 235 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 KDF1Q8NAX2 398 aaPredicted RBP12.68□□□□□ -0.38
CNOT4-208ENST00000465721 OSCP1Q8WVF1 389 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 ATP2A3Q93084 1043 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 ZSCAN31Q96LW9 406 aaPredicted RBP12.68□□□□□ -0.38
CNOT4-208ENST00000465721 SLC22A12Q96S37 553 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 PKMYT1Q99640 499 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 PI4K2AQ9BTU6 479 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 TPSD1Q9BZJ3 242 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 TMEM206Q9H813 350 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 SH2B1Q9NRF2 756 aaPredicted RBP12.68□□□□□ -0.38
CNOT4-208ENST00000465721 BLOC1S4Q9NUP1 217 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 DUS2Q9NX74 493 aaKnown RBP12.68□□□□□ -0.38
CNOT4-208ENST00000465721 MAGED2Q9UNF1 606 aaPredicted RBP12.68□□□□□ -0.38
CNOT4-208ENST00000465721 WNT6Q9Y6F9 365 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 STYXL1Q9Y6J8 313 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 MYH10P35580 1976 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 CELSR3Q9NYQ7 3312 aa12.68□□□□□ -0.38
CNOT4-208ENST00000465721 KPNA7A9QM74 516 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 CDX4O14627 284 aaPredicted RBP12.67□□□□□ -0.38
CNOT4-208ENST00000465721 SLC26A4O43511 780 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 PRPF40AO75400 957 aaKnown RBP12.67□□□□□ -0.38
CNOT4-208ENST00000465721 BCKDHBP21953 392 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 GBP1P32455 592 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 DGKEP52429 567 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 WNT7BP56706 349 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 TSPY1Q01534 308 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 DDR2Q16832 855 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 CCDC142Q17RM4 750 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 DAB2IPQ5VWQ8 1189 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 ARL6IP4Q66PJ3 421 aaKnown RBP12.67□□□□□ -0.38
CNOT4-208ENST00000465721 ADALQ6DHV7 355 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 PDCL2Q8N4E4 241 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 TSTD1Q8NFU3 115 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 GATA6Q92908 595 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 EXOC4Q96A65 974 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 MYRFLQ96LU7 910 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 IKZF4Q9H2S9 585 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 TRPC7Q9HCX4 862 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 ABCB6Q9NP58 842 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 GCNT4Q9P109 453 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 L1RE1Q9UN81 338 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 GCN1Q92616 2671 aaKnown RBP12.67□□□□□ -0.38
CNOT4-208ENST00000465721 APC2O95996 2303 aa12.67□□□□□ -0.38
CNOT4-208ENST00000465721 ANTXRLA6NF34 631 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 PATE3B3GLJ2 98 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 CKMP06732 381 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 USP17L7P0C7H9 530 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 CHRM1P11229 460 aaPredicted RBP12.66□□□□□ -0.38
CNOT4-208ENST00000465721 HOXB3P14651 431 aaPredicted RBP12.66□□□□□ -0.38
CNOT4-208ENST00000465721 CSRP1P21291 193 aaKnown RBP12.66□□□□□ -0.38
CNOT4-208ENST00000465721 CYP2F1P24903 491 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 IFNAR2P48551 515 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 POU5F1Q01860 360 aaKnown RBP12.66□□□□□ -0.38
CNOT4-208ENST00000465721 MCM6Q14566 821 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 NFE2Q16621 373 aaPredicted RBP12.66□□□□□ -0.38
CNOT4-208ENST00000465721 GAB4Q2WGN9 574 aa12.66□□□□□ -0.38
CNOT4-208ENST00000465721 ZC2HC1CQ53FD0 456 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms