RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 LRRC71Q8N4P6 559 aa6.51□□□□□ -1.37
SMC4-205ENST00000465563 PCSK9Q8NBP7 692 aaKnown RBP6.51□□□□□ -1.37
SMC4-205ENST00000465563 ASPSCR1Q9BZE9 553 aa6.51□□□□□ -1.37
SMC4-205ENST00000465563 SSX2IPQ9Y2D8 614 aa6.51□□□□□ -1.37
SMC4-205ENST00000465563 TBC1D30Q9Y2I9 924 aa6.51□□□□□ -1.37
SMC4-205ENST00000465563 ZNF521Q96K83 1311 aa6.5□□□□□ -1.37
SMC4-205ENST00000465563 MOSPD3O75425 235 aa6.5□□□□□ -1.37
SMC4-205ENST00000465563 DNAJB5O75953 348 aa6.5□□□□□ -1.37
SMC4-205ENST00000465563 IGKV2-30P06310 120 aa6.5□□□□□ -1.37
SMC4-205ENST00000465563 FESP07332 822 aa6.5□□□□□ -1.37
SMC4-205ENST00000465563 HOXA4Q00056 320 aaPredicted RBP6.5□□□□□ -1.37
SMC4-205ENST00000465563 SP2Q02086 613 aa6.5□□□□□ -1.37
SMC4-205ENST00000465563 ARHGAP40Q5TG30 622 aa6.5□□□□□ -1.37
SMC4-205ENST00000465563 EMC10Q5UCC4 262 aa6.5□□□□□ -1.37
SMC4-205ENST00000465563 NAPRTQ6XQN6 538 aa6.5□□□□□ -1.37
SMC4-205ENST00000465563 ZBTB9Q96C00 473 aa6.5□□□□□ -1.37
SMC4-205ENST00000465563 MOGAT1Q96PD6 335 aa6.5□□□□□ -1.37
SMC4-205ENST00000465563 GLOD4Q9HC38 313 aa6.5□□□□□ -1.37
SMC4-205ENST00000465563 IL33O95760 270 aa6.49□□□□□ -1.37
SMC4-205ENST00000465563 HDCP19113 662 aa6.49□□□□□ -1.37
SMC4-205ENST00000465563 LILRA4P59901 499 aa6.49□□□□□ -1.37
SMC4-205ENST00000465563 CYP4F2P78329 520 aa6.49□□□□□ -1.37
SMC4-205ENST00000465563 PLS1Q14651 629 aa6.49□□□□□ -1.37
SMC4-205ENST00000465563 TMEM240Q5SV17 173 aa6.49□□□□□ -1.37
SMC4-205ENST00000465563 PARS2Q7L3T8 475 aaKnown RBP6.49□□□□□ -1.37
SMC4-205ENST00000465563 RP9Q8TA86 221 aaKnown RBP6.49□□□□□ -1.37
SMC4-205ENST00000465563 ATG4AQ8WYN0 398 aa6.49□□□□□ -1.37
SMC4-205ENST00000465563 ZNF48Q96MX3 618 aaPredicted RBP6.49□□□□□ -1.37
SMC4-205ENST00000465563 FSD1LQ9BXM9 530 aa6.49□□□□□ -1.37
SMC4-205ENST00000465563 ADAMTS5Q9UNA0 930 aa6.49□□□□□ -1.37
SMC4-205ENST00000465563 PLEKHM1Q9Y4G2 1056 aa6.49□□□□□ -1.37
SMC4-205ENST00000465563 A1L4Q6 167 aa6.48□□□□□ -1.37
SMC4-205ENST00000465563 IKBKBO14920 756 aa6.48□□□□□ -1.37
SMC4-205ENST00000465563 UNC5CO95185 931 aa6.48□□□□□ -1.37
SMC4-205ENST00000465563 NPSP0C0P6 89 aa6.48□□□□□ -1.37
SMC4-205ENST00000465563 NKX6-1P78426 367 aaPredicted RBP6.48□□□□□ -1.37
SMC4-205ENST00000465563 GTF2H3Q13889 308 aa6.48□□□□□ -1.37
SMC4-205ENST00000465563 E2F2Q14209 437 aa6.48□□□□□ -1.37
SMC4-205ENST00000465563 RGS7BPQ6MZT1 257 aaPredicted RBP6.48□□□□□ -1.37
SMC4-205ENST00000465563 CATSPERGQ6ZRH7 1159 aa6.48□□□□□ -1.37
SMC4-205ENST00000465563 CATIPQ7Z7H3 387 aa6.48□□□□□ -1.37
SMC4-205ENST00000465563 PNLDC1Q8NA58 520 aaKnown RBP6.48□□□□□ -1.37
SMC4-205ENST00000465563 GLG1Q92896 1179 aa6.48□□□□□ -1.37
SMC4-205ENST00000465563 HSPBAP1Q96EW2 488 aa6.48□□□□□ -1.37
SMC4-205ENST00000465563 SLC35A4Q96G79 324 aa6.48□□□□□ -1.37
SMC4-205ENST00000465563 ADAMTS3O15072 1205 aa6.47□□□□□ -1.37
SMC4-205ENST00000465563 KCNJ5P48544 419 aa6.47□□□□□ -1.37
SMC4-205ENST00000465563 SOX8P57073 446 aa6.47□□□□□ -1.37
SMC4-205ENST00000465563 KRTAP10-9P60411 292 aa6.47□□□□□ -1.37
SMC4-205ENST00000465563 TBC1D25Q3MII6 688 aa6.47□□□□□ -1.37
SMC4-205ENST00000465563 SLC2A7Q6PXP3 512 aa6.47□□□□□ -1.37
SMC4-205ENST00000465563 TRIM72Q6ZMU5 477 aa6.47□□□□□ -1.37
SMC4-205ENST00000465563 CHSY1Q86X52 802 aa6.47□□□□□ -1.37
SMC4-205ENST00000465563 CYP2W1Q8TAV3 490 aa6.47□□□□□ -1.37
SMC4-205ENST00000465563 ASB2Q96Q27 587 aa6.47□□□□□ -1.37
SMC4-205ENST00000465563 MACROD1Q9BQ69 325 aa6.47□□□□□ -1.37
SMC4-205ENST00000465563 GTPBP4Q9BZE4 634 aaKnown RBP6.47□□□□□ -1.37
SMC4-205ENST00000465563 SARS2Q9NP81 518 aaKnown RBP6.47□□□□□ -1.37
SMC4-205ENST00000465563 CCNL1Q9UK58 526 aaPredicted RBP6.47□□□□□ -1.37
SMC4-205ENST00000465563 SHOC2Q9UQ13 582 aa6.47□□□□□ -1.37
SMC4-205ENST00000465563 GRPP07492 148 aa6.46□□□□□ -1.38
SMC4-205ENST00000465563 VIPR2P41587 438 aa6.46□□□□□ -1.38
SMC4-205ENST00000465563 SATB1Q01826 763 aa6.46□□□□□ -1.38
SMC4-205ENST00000465563 KHDC1LQ5JSQ8 128 aa6.46□□□□□ -1.38
SMC4-205ENST00000465563 GALNT16Q8N428 558 aa6.46□□□□□ -1.38
SMC4-205ENST00000465563 XAGE5Q8WWM1 108 aa6.46□□□□□ -1.38
SMC4-205ENST00000465563 R3HDM4Q96D70 268 aa6.46□□□□□ -1.38
SMC4-205ENST00000465563 MVB12AQ96EY5 273 aa6.46□□□□□ -1.38
SMC4-205ENST00000465563 CDK5RAP3Q96JB5 506 aa6.46□□□□□ -1.38
SMC4-205ENST00000465563 PRSS22Q9GZN4 317 aa6.46□□□□□ -1.38
SMC4-205ENST00000465563 NDRG4Q9ULP0 352 aaKnown RBP6.46□□□□□ -1.38
SMC4-205ENST00000465563 PCDHA6Q9UN73 950 aa6.46□□□□□ -1.38
SMC4-205ENST00000465563 LUC7L2Q9Y383 392 aaKnown RBP6.46□□□□□ -1.38
SMC4-205ENST00000465563 SMIM35A0A1B0GVV1 85 aa6.45□□□□□ -1.38
SMC4-205ENST00000465563 PPEF2O14830 753 aa6.45□□□□□ -1.38
SMC4-205ENST00000465563 TOP3BO95985 862 aaKnown RBP6.45□□□□□ -1.38
SMC4-205ENST00000465563 AKAP5P24588 427 aa6.45□□□□□ -1.38
SMC4-205ENST00000465563 MMP13P45452 471 aa6.45□□□□□ -1.38
SMC4-205ENST00000465563 TPTEP56180 551 aa6.45□□□□□ -1.38
SMC4-205ENST00000465563 Q6ZWC4 215 aa6.45□□□□□ -1.38
SMC4-205ENST00000465563 C8orf58Q8NAV2 365 aa6.45□□□□□ -1.38
SMC4-205ENST00000465563 MTFMTQ96DP5 389 aaKnown RBP6.45□□□□□ -1.38
SMC4-205ENST00000465563 DAZAP1Q96EP5 407 aaKnown RBP6.45□□□□□ -1.38
SMC4-205ENST00000465563 C5orf34Q96MH7 638 aa6.45□□□□□ -1.38
SMC4-205ENST00000465563 CADPSQ9ULU8 1353 aa6.44□□□□□ -1.38
SMC4-205ENST00000465563 CYP2D7A0A087X1C5 515 aa6.44□□□□□ -1.38
SMC4-205ENST00000465563 KCNU1A8MYU2 1149 aa6.44□□□□□ -1.38
SMC4-205ENST00000465563 ERC2O15083 957 aa6.44□□□□□ -1.38
SMC4-205ENST00000465563 KCNAB3O43448 404 aa6.44□□□□□ -1.38
SMC4-205ENST00000465563 TJP3O95049 919 aa6.44□□□□□ -1.38
SMC4-205ENST00000465563 DLDP09622 509 aaKnown RBP6.44□□□□□ -1.38
SMC4-205ENST00000465563 VCAM1P19320 739 aa6.44□□□□□ -1.38
SMC4-205ENST00000465563 SFPQP23246 707 aaKnown RBP eCLIP6.44□□□□□ -1.38
SMC4-205ENST00000465563 GPSM2P81274 684 aa6.44□□□□□ -1.38
SMC4-205ENST00000465563 CNGA4Q8IV77 575 aa6.44□□□□□ -1.38
SMC4-205ENST00000465563 ABHD11Q8NFV4 315 aa6.44□□□□□ -1.38
SMC4-205ENST00000465563 ANLNQ9NQW6 1124 aa6.44□□□□□ -1.38
SMC4-205ENST00000465563 TUBA8Q9NY65 449 aaPredicted RBP6.44□□□□□ -1.38
SMC4-205ENST00000465563 XPR1Q9UBH6 696 aa6.44□□□□□ -1.38
SMC4-205ENST00000465563 H7C1Q1 480 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms