RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 KRBA2Q6ZNG9 492 aa18.37■□□□□ 0.53
TOM1-213ENST00000465529 DPH6Q7L8W6 267 aa18.37■□□□□ 0.53
TOM1-213ENST00000465529 YAF2Q8IY57 180 aa18.37■□□□□ 0.53
TOM1-213ENST00000465529 MAB21L3Q8N8X9 362 aa18.37■□□□□ 0.53
TOM1-213ENST00000465529 RIN3Q8TB24 985 aa18.37■□□□□ 0.53
TOM1-213ENST00000465529 SPATA18Q8TC71 538 aa18.37■□□□□ 0.53
TOM1-213ENST00000465529 GCNAQ96QF7 691 aa18.37■□□□□ 0.53
TOM1-213ENST00000465529 SCAND2PQ9GZW5 306 aaPredicted RBP18.37■□□□□ 0.53
TOM1-213ENST00000465529 DPEP3Q9H4B8 488 aa18.37■□□□□ 0.53
TOM1-213ENST00000465529 SPATA6Q9NWH7 488 aaPredicted RBP18.37■□□□□ 0.53
TOM1-213ENST00000465529 CGNQ9P2M7 1197 aaKnown RBP18.37■□□□□ 0.53
TOM1-213ENST00000465529 MAPK8IP1Q9UQF2 711 aa18.37■□□□□ 0.53
TOM1-213ENST00000465529 CCL26Q9Y258 94 aa18.37■□□□□ 0.53
TOM1-213ENST00000465529 A0A1W2PQ27 194 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 A0A1W2PQ64 194 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 A0A1W2PQD8 194 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 PRR23AA6NEV1 266 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 SLC38A8A6NNN8 435 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 DPYSL4O14531 572 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 NR3C1P04150 777 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 CSH1P0DML2 217 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 CSH2P0DML3 217 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 RAP1GAPP47736 663 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 FCHO2Q0JRZ9 810 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 PSMD2Q13200 908 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 ZNF687Q8N1G0 1237 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 PARD3BQ8TEW8 1205 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 BCO2Q9BYV7 579 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 XYLT2Q9H1B5 865 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 ABCB6Q9NP58 842 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 NXF1Q9UBU9 619 aaKnown RBP18.36■□□□□ 0.53
TOM1-213ENST00000465529 CDH9Q9ULB4 789 aa18.36■□□□□ 0.53
TOM1-213ENST00000465529 CHADO15335 359 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 NOL4O94818 638 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 ZNF202O95125 648 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 VNN1O95497 513 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 SP9P0CG40 484 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 BDNFP23560 247 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 CCNE1P24864 410 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 RPL10AP62906 217 aaKnown RBP18.35■□□□□ 0.53
TOM1-213ENST00000465529 CYP27A1Q02318 531 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 TNK2Q07912 1038 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 BIRC3Q13489 604 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 TRPC3Q13507 836 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 CFAP221Q4G0U5 840 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 MDH1BQ5I0G3 518 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 WDR44Q5JSH3 913 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 SCARA5Q6ZMJ2 495 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 CMTM8Q8IZV2 173 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 OR6B3Q8NGW1 331 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 FAM3CQ92520 227 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 E2F7Q96AV8 911 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 PCED1BQ96HM7 432 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 OSBPL6Q9BZF3 934 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 SMYD3Q9H7B4 428 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 GTSE1Q9NYZ3 720 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 ATP6V1DQ9Y5K8 247 aa18.35■□□□□ 0.53
TOM1-213ENST00000465529 PDXKO00764 312 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 PHACTR2O75167 634 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 RHOBTB3O94955 611 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 CLSTN1O94985 981 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 C4BPAP04003 597 aaKnown RBP18.34■□□□□ 0.53
TOM1-213ENST00000465529 GNL1P36915 607 aaPredicted RBP18.34■□□□□ 0.53
TOM1-213ENST00000465529 CACNA2D1P54289 1103 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 CDH8P55286 799 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 TNNC1P63316 161 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 CEP135Q66GS9 1140 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 TXNDC11Q6PKC3 985 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 SLC9A9Q8IVB4 645 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 GOLGA5Q8TBA6 731 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 BPIFB1Q8TDL5 484 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 CSGALNACT1Q8TDX6 532 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 USP13Q92995 863 aaPredicted RBP18.34■□□□□ 0.53
TOM1-213ENST00000465529 CLDN23Q96B33 292 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 FUBP3Q96I24 572 aaKnown RBP eCLIP18.34■□□□□ 0.53
TOM1-213ENST00000465529 SDCBP2Q9H190 292 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 SNX25Q9H3E2 840 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 TRPV5Q9NQA5 729 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 TMEM30AQ9NV96 361 aa18.34■□□□□ 0.53
TOM1-213ENST00000465529 MAGEC2Q9UBF1 373 aaPredicted RBP18.34■□□□□ 0.53
TOM1-213ENST00000465529 CLDN5O00501 218 aa18.33■□□□□ 0.52
TOM1-213ENST00000465529 TACC1O75410 805 aa18.33■□□□□ 0.52
TOM1-213ENST00000465529 MYL1P05976 194 aa18.33■□□□□ 0.52
TOM1-213ENST00000465529 USP46P62068 366 aa18.33■□□□□ 0.52
TOM1-213ENST00000465529 C1orf220Q5T0J3 134 aa18.33■□□□□ 0.52
TOM1-213ENST00000465529 TRIM68Q6AZZ1 485 aa18.33■□□□□ 0.52
TOM1-213ENST00000465529 TSSK4Q6SA08 328 aa18.33■□□□□ 0.52
TOM1-213ENST00000465529 C4orf50Q6ZRC1 276 aa18.33■□□□□ 0.52
TOM1-213ENST00000465529 SMYD4Q8IYR2 804 aaPredicted RBP18.33■□□□□ 0.52
TOM1-213ENST00000465529 NKD2Q969F2 451 aaPredicted RBP18.33■□□□□ 0.52
TOM1-213ENST00000465529 SLC22A12Q96S37 553 aa18.33■□□□□ 0.52
TOM1-213ENST00000465529 TRPC7Q9HCX4 862 aa18.33■□□□□ 0.52
TOM1-213ENST00000465529 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.33■□□□□ 0.524e-7■■■■■ 57.7
TOM1-213ENST00000465529 RBM12Q9NTZ6 932 aaKnown RBP18.33■□□□□ 0.52
TOM1-213ENST00000465529 OBP2AQ9NY56 170 aa18.33■□□□□ 0.52
TOM1-213ENST00000465529 HELZP42694 1942 aaKnown RBP18.33■□□□□ 0.52
TOM1-213ENST00000465529 MAN2B1O00754 1011 aa18.32■□□□□ 0.52
TOM1-213ENST00000465529 LAMTOR5O43504 91 aa18.32■□□□□ 0.52
TOM1-213ENST00000465529 STAU1O95793 577 aaKnown RBP18.32■□□□□ 0.52
TOM1-213ENST00000465529 WEE1P30291 646 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms