RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 CERS4Q9HA82 394 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 NAGPAQ9UK23 515 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 TSPAN16Q9UKR8 245 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 PTPRDP23468 1912 aa18.26■□□□□ 0.51
PTPRU-206ENST00000465525 EIF3CLB5ME19 914 aaKnown RBP18.25■□□□□ 0.51
PTPRU-206ENST00000465525 H3BNC9 293 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 ADAM12O43184 909 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 CA8P35219 290 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 TSPY1Q01534 308 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 CNGA2Q16280 664 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 PSMD5Q16401 504 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 ZNF280DQ6N043 979 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 C1orf131Q8NDD1 294 aaKnown RBP18.25■□□□□ 0.51
PTPRU-206ENST00000465525 SPPL3Q8TCT6 385 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 MYLPFQ96A32 169 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 PCED1BQ96HM7 432 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 EIF3CQ99613 913 aaKnown RBP18.25■□□□□ 0.51
PTPRU-206ENST00000465525 PACSIN1Q9BY11 444 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 CHST7Q9NS84 486 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 KIAA1257Q9ULG3 409 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 GLUD2P49448 558 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 SPA17Q15506 151 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 CLEC16AQ2KHT3 1053 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 SLC39A12Q504Y0 691 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 ARHGAP17Q68EM7 881 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 ALKBH5Q6P6C2 394 aaKnown RBP18.25■□□□□ 0.51
PTPRU-206ENST00000465525 LCLAT1Q6UWP7 414 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 ANKS3Q6ZW76 656 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 TTC30AQ86WT1 665 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 FUKQ8N0W3 1084 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 MYCBPAPQ8TBZ2 947 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 ARNTL2Q8WYA1 636 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 PKMYT1Q99640 499 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 ZNF518BQ9C0D4 1074 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 DNAI2Q9GZS0 605 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 ZCWPW1Q9H0M4 648 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 NENFQ9UMX5 172 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 PCDHGC3Q9UN70 934 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 ADGRG1Q9Y653 693 aa18.25■□□□□ 0.51
PTPRU-206ENST00000465525 H7C4K7 107 aa18.24■□□□□ 0.51
PTPRU-206ENST00000465525 NOMO3P69849 1222 aa18.24■□□□□ 0.51
PTPRU-206ENST00000465525 GPM6BQ13491 265 aa18.24■□□□□ 0.51
PTPRU-206ENST00000465525 C2CD6Q53TS8 623 aa18.24■□□□□ 0.51
PTPRU-206ENST00000465525 PAQR9Q6ZVX9 377 aa18.24■□□□□ 0.51
PTPRU-206ENST00000465525 WDTC1Q8N5D0 677 aa18.24■□□□□ 0.51
PTPRU-206ENST00000465525 PIK3R5Q8WYR1 880 aa18.24■□□□□ 0.51
PTPRU-206ENST00000465525 SECISBP2LQ93073 1101 aaKnown RBP18.24■□□□□ 0.51
PTPRU-206ENST00000465525 PGLYRP2Q96PD5 576 aa18.24■□□□□ 0.51
PTPRU-206ENST00000465525 TRMT1Q9NXH9 659 aaKnown RBP18.24■□□□□ 0.51
PTPRU-206ENST00000465525 CYTH4Q9UIA0 394 aa18.24■□□□□ 0.51
PTPRU-206ENST00000465525 ZKSCAN5Q9Y2L8 839 aa18.24■□□□□ 0.51
PTPRU-206ENST00000465525 PCDHA13Q9Y5I0 950 aa18.24■□□□□ 0.51
PTPRU-206ENST00000465525 CDY1Q9Y6F8 540 aa18.24■□□□□ 0.51
PTPRU-206ENST00000465525 TULP2O00295 520 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 IPO7O95373 1038 aaKnown RBP18.23■□□□□ 0.51
PTPRU-206ENST00000465525 LCA5LO95447 670 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 CYP1A1P04798 512 aaPredicted RBP18.23■□□□□ 0.51
PTPRU-206ENST00000465525 URODP06132 367 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 CPB1P15086 417 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 DNAJB1P25685 340 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 ANXA13P27216 316 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 DSG1Q02413 1049 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 SMYD5Q6GMV2 418 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 FAM171BQ6P995 826 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 FAM35AQ86V20 835 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 GPR65Q8IYL9 337 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 POF1BQ8WVV4 589 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 ZNF576Q9H609 170 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 KRT82Q9NSB4 513 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 MTRRQ9UBK8 725 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 HESX1Q9UBX0 185 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 SSX2IPQ9Y2D8 614 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 PPP2R2CQ9Y2T4 447 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 PCDHGC5Q9Y5F6 944 aa18.23■□□□□ 0.51
PTPRU-206ENST00000465525 TMEM265A0A087WTH1 108 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 RCCD1A6NED2 376 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 OR6C75A6NL08 312 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 USP27XA6NNY8 438 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 TBC1D4O60343 1298 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 FTLP02792 175 aaPredicted RBP18.22■□□□□ 0.51
PTPRU-206ENST00000465525 UNGP13051 313 aaPredicted RBP18.22■□□□□ 0.51
PTPRU-206ENST00000465525 MAGEA1P43355 309 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 CACNA2D1P54289 1103 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 TRIM72Q6ZMU5 477 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 PHLDB2Q86SQ0 1253 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 HNRNPABQ99729 332 aaKnown RBP18.22■□□□□ 0.51
PTPRU-206ENST00000465525 ZBP1Q9H171 429 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 ABI2Q9NYB9 513 aaPredicted RBP18.22■□□□□ 0.51
PTPRU-206ENST00000465525 TRIOBPQ9H2D6 2365 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 CHD7Q9P2D1 2997 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 PIK3R2O00459 728 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 GRM6O15303 877 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 BEST1O76090 585 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 CCDC175P0C221 793 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 CTSAP10619 480 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 ABCB4P21439 1286 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 BDNFP23560 247 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 OR1D2P34982 312 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 RGS7P49802 495 aa18.22■□□□□ 0.51
PTPRU-206ENST00000465525 ERVFC1P60507 584 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms