RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 R3HCC1Q9Y3T6 440 aaKnown RBP24.45■■□□□ 1.5
USP42-205ENST00000465073 GABRDO14764 452 aa24.44■■□□□ 1.5
USP42-205ENST00000465073 ATG13O75143 517 aa24.44■■□□□ 1.5
USP42-205ENST00000465073 PRPF6O94906 941 aaKnown RBP24.44■■□□□ 1.5
USP42-205ENST00000465073 MYO1EQ12965 1108 aa24.44■■□□□ 1.5
USP42-205ENST00000465073 PDGFRLQ15198 375 aa24.44■■□□□ 1.5
USP42-205ENST00000465073 CFAP221Q4G0U5 840 aa24.44■■□□□ 1.5
USP42-205ENST00000465073 SCARA3Q6AZY7 606 aa24.44■■□□□ 1.5
USP42-205ENST00000465073 TRIM68Q6AZZ1 485 aa24.44■■□□□ 1.5
USP42-205ENST00000465073 STXBP4Q6ZWJ1 553 aa24.44■■□□□ 1.5
USP42-205ENST00000465073 CEP68Q76N32 757 aa24.44■■□□□ 1.5
USP42-205ENST00000465073 SPATA2LQ8IUW3 424 aaPredicted RBP24.44■■□□□ 1.5
USP42-205ENST00000465073 ADGRF2Q8IZF7 708 aa24.44■■□□□ 1.5
USP42-205ENST00000465073 STKLD1Q8NE28 680 aa24.44■■□□□ 1.5
USP42-205ENST00000465073 FUBP3Q96I24 572 aaKnown RBP eCLIP24.44■■□□□ 1.5
USP42-205ENST00000465073 MTMR12Q9C0I1 747 aa24.44■■□□□ 1.5
USP42-205ENST00000465073 ZSCAN16Q9H4T2 348 aaPredicted RBP24.44■■□□□ 1.5
USP42-205ENST00000465073 SEMA4GQ9NTN9 838 aa24.44■■□□□ 1.5
USP42-205ENST00000465073 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.44■■□□□ 1.5
USP42-205ENST00000465073 OTOL1A6NHN0 477 aaPredicted RBP24.43■■□□□ 1.5
USP42-205ENST00000465073 FOXD2O60548 495 aaPredicted RBP24.43■■□□□ 1.5
USP42-205ENST00000465073 CSRP2Q16527 193 aa24.43■■□□□ 1.5
USP42-205ENST00000465073 SOWAHAQ2M3V2 549 aa24.43■■□□□ 1.5
USP42-205ENST00000465073 FSTL4Q6MZW2 842 aa24.43■■□□□ 1.5
USP42-205ENST00000465073 DPH6Q7L8W6 267 aa24.43■■□□□ 1.5
USP42-205ENST00000465073 OSTM1Q86WC4 334 aa24.43■■□□□ 1.5
USP42-205ENST00000465073 NETO1Q8TDF5 533 aa24.43■■□□□ 1.5
USP42-205ENST00000465073 ANKRD36BP1Q96IX9 119 aa24.43■■□□□ 1.5
USP42-205ENST00000465073 FAM84AQ96KN4 292 aa24.43■■□□□ 1.5
USP42-205ENST00000465073 LRRC27Q9C0I9 530 aa24.43■■□□□ 1.5
USP42-205ENST00000465073 INTS13Q9NVM9 706 aa24.43■■□□□ 1.5
USP42-205ENST00000465073 MTMR6Q9Y217 621 aa24.43■■□□□ 1.5
USP42-205ENST00000465073 SPTBN2O15020 2390 aa24.42■■□□□ 1.5
USP42-205ENST00000465073 ZNF233A6NK53 670 aa24.42■■□□□ 1.5
USP42-205ENST00000465073 ARSAP15289 507 aa24.42■■□□□ 1.5
USP42-205ENST00000465073 SURF1Q15526 300 aa24.42■■□□□ 1.5
USP42-205ENST00000465073 FAM160A2Q8N612 972 aaPredicted RBP24.42■■□□□ 1.5
USP42-205ENST00000465073 PDILTQ8N807 584 aa24.42■■□□□ 1.5
USP42-205ENST00000465073 EXOC4Q96A65 974 aa24.42■■□□□ 1.5
USP42-205ENST00000465073 CCDC163A0A0D9SF12 145 aa24.41■■□□□ 1.5
USP42-205ENST00000465073 DCDC2BA2VCK2 349 aa24.41■■□□□ 1.5
USP42-205ENST00000465073 TADA3O75528 432 aa24.41■■□□□ 1.5
USP42-205ENST00000465073 MAGEA11P43364 429 aa24.41■■□□□ 1.5
USP42-205ENST00000465073 FAM160A1Q05DH4 1040 aa24.41■■□□□ 1.5
USP42-205ENST00000465073 FAM171BQ6P995 826 aa24.41■■□□□ 1.5
USP42-205ENST00000465073 RIN3Q8TB24 985 aa24.41■■□□□ 1.5
USP42-205ENST00000465073 CHFRQ96EP1 664 aa24.41■■□□□ 1.5
USP42-205ENST00000465073 HPDLQ96IR7 371 aa24.41■■□□□ 1.5
USP42-205ENST00000465073 SLC8A2Q9UPR5 921 aa24.41■■□□□ 1.5
USP42-205ENST00000465073 TRAV19A0A0A6YYK7 116 aa24.4■■□□□ 1.5
USP42-205ENST00000465073 TNNC2P02585 160 aa24.4■■□□□ 1.5
USP42-205ENST00000465073 USP17L7P0C7H9 530 aa24.4■■□□□ 1.5
USP42-205ENST00000465073 DRD1P21728 446 aa24.4■■□□□ 1.5
USP42-205ENST00000465073 NASPP49321 788 aaPredicted RBP24.4■■□□□ 1.5
USP42-205ENST00000465073 DUOXA2Q1HG44 320 aa24.4■■□□□ 1.5
USP42-205ENST00000465073 PKN3Q6P5Z2 889 aa24.4■■□□□ 1.5
USP42-205ENST00000465073 PRR23CQ6ZRP0 262 aa24.4■■□□□ 1.5
USP42-205ENST00000465073 LIMS2Q7Z4I7 341 aa24.4■■□□□ 1.5
USP42-205ENST00000465073 SCN4BQ8IWT1 228 aa24.4■■□□□ 1.5
USP42-205ENST00000465073 CPA6Q8N4T0 437 aa24.4■■□□□ 1.5
USP42-205ENST00000465073 FSIP1Q8NA03 581 aa24.4■■□□□ 1.5
USP42-205ENST00000465073 TNMDQ9H2S6 317 aa24.4■■□□□ 1.5
USP42-205ENST00000465073 KIAA1586Q9HCI6 787 aa24.4■■□□□ 1.5
USP42-205ENST00000465073 KIF26AQ9ULI4 1882 aaPredicted RBP24.4■■□□□ 1.5
USP42-205ENST00000465073 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.39■■□□□ 1.5
USP42-205ENST00000465073 SLC30A4O14863 429 aa24.39■■□□□ 1.5
USP42-205ENST00000465073 HOXC13P31276 330 aa24.39■■□□□ 1.5
USP42-205ENST00000465073 MTF1Q14872 753 aa24.39■■□□□ 1.5
USP42-205ENST00000465073 C4orf50Q6ZRC1 276 aa24.39■■□□□ 1.5
USP42-205ENST00000465073 OR5B17Q8NGF7 314 aa24.39■■□□□ 1.5
USP42-205ENST00000465073 GAB3Q8WWW8 586 aa24.39■■□□□ 1.5
USP42-205ENST00000465073 CYP2S1Q96SQ9 504 aa24.39■■□□□ 1.5
USP42-205ENST00000465073 TRPC7Q9HCX4 862 aa24.39■■□□□ 1.5
USP42-205ENST00000465073 DUS2Q9NX74 493 aaKnown RBP24.39■■□□□ 1.5
USP42-205ENST00000465073 CDH9Q9ULB4 789 aa24.39■■□□□ 1.5
USP42-205ENST00000465073 DENND4CQ5VZ89 1909 aa24.39■■□□□ 1.49
USP42-205ENST00000465073 CKMP06732 381 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 GALK1P51570 392 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 STK38Q15208 465 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 MAPRE1Q15691 268 aaKnown RBP24.38■■□□□ 1.49
USP42-205ENST00000465073 CCDC142Q17RM4 750 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 FBXO43Q4G163 708 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 LMBRD2Q68DH5 695 aaPredicted RBP24.38■■□□□ 1.49
USP42-205ENST00000465073 CBWD2Q8IUF1 395 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 LINC00301Q8NCQ3 95 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 OSCP1Q8WVF1 389 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 P2RY13Q9BPV8 354 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 SYT15Q9BQS2 421 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 CUEDC2Q9H467 287 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 ECT2Q9H8V3 914 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 FBRSL1Q9HCM7 1045 aaKnown RBP24.38■■□□□ 1.49
USP42-205ENST00000465073 KBTBD4Q9NVX7 518 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 MAGEC2Q9UBF1 373 aaPredicted RBP24.38■■□□□ 1.49
USP42-205ENST00000465073 PTPRJQ12913 1337 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 HCRTO43612 131 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 STX6O43752 255 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 ATP2C2O75185 946 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 EGFP01133 1207 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 AMPD3Q01432 767 aa24.38■■□□□ 1.49
USP42-205ENST00000465073 ZNF77Q15935 545 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms