RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 PRKCSHP14314 528 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 ATF6P18850 670 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 TRIM21P19474 475 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 BDNFP23560 247 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 TBXAS1P24557 533 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 MAGEA11P43364 429 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 RPL10AP62906 217 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 ORC1Q13415 861 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 VEPH1Q14D04 833 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 VWA3BQ502W6 1294 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 CYP4A22Q5TCH4 519 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 VSTM1Q6UX27 236 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 DNAJB7Q7Z6W7 309 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 HS6ST3Q8IZP7 471 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 LEMD2Q8NC56 503 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 WHAMMQ8TF30 809 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 GIPC2Q8TF65 315 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 PSMG2Q969U7 264 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 ARID3AQ99856 593 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 FUCA2Q9BTY2 467 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 B3GNT5Q9BYG0 378 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 NDST4Q9H3R1 872 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 CD320Q9NPF0 282 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 MUC3AQ02505 3323 aa15.45■□□□□ 0.06
SQSTM1-205ENST00000464493 C2CD4DB7Z1M9 353 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 ZNF197O14709 1029 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 GBP2P32456 591 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 GRIK1P39086 918 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 GPR15P49685 360 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 EPHA5P54756 1037 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 YWHAEP62258 255 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 NFKBIBQ15653 356 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 TAF12Q16514 161 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 DDR2Q16832 855 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 MIIPQ5JXC2 388 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 CDKAL1Q5VV42 579 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 GBP6Q6ZN66 633 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 PDZD4Q76G19 769 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 GET4Q7L5D6 327 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 SCN4BQ8IWT1 228 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 PLCD3Q8N3E9 789 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 PPM1KQ8N3J5 372 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 C12orf29Q8N999 325 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 TDRD5Q8NAT2 981 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 ITFG1Q8TB96 612 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 GPR152Q8TDT2 470 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 TWNKQ96RR1 684 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 BPIFA3Q9BQP9 254 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 CRACR2AQ9BSW2 395 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 ELOVL4Q9GZR5 314 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 INTS2Q9H0H0 1204 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 ASAH2Q9NR71 780 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 GCNT4Q9P109 453 aa15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 MRPS23Q9Y3D9 190 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-205ENST00000464493 GTPBP10A4D1E9 387 aaKnown RBP15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 CLDN5O00501 218 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 MYL4P12829 197 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 NCAPHQ15003 741 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 EXOC3L4Q17RC7 722 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 SLC5A9Q2M3M2 681 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 ZSCAN23Q3MJ62 389 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 ZNF394Q53GI3 561 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 PRSS36Q5K4E3 855 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 SDHAF4Q5VUM1 108 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 PAQR9Q6ZVX9 377 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 RRAGAQ7L523 313 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 ZDHHC14Q8IZN3 488 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 AOPEPQ8N6M6 819 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 HEXIM2Q96MH2 286 aaKnown RBP15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 MYADMQ96S97 322 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 MED10Q9BTT4 135 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 LRRC3Q9BY71 257 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 ZNF518BQ9C0D4 1074 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 PTPRDP23468 1912 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 ATP8B3O60423 1300 aa15.43■□□□□ 0.06
SQSTM1-205ENST00000464493 SMTNL1A8MU46 457 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 PES1O00541 588 aaKnown RBP15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 TRIM66O15016 1216 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 MICAL2O94851 1124 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 TPM2P07951 284 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 CSH1P0DML2 217 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 CSH2P0DML3 217 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 LAMP2P13473 410 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 SLC9A1P19634 815 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 CDK11BP21127 795 aaKnown RBP15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 ANXA13P27216 316 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 CCR2P41597 374 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 ZNF165P49910 485 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 RAD23BP54727 409 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 GCNT1Q02742 428 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 KRT31Q15323 416 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 PHLDB3Q6NSJ2 640 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 TMC8Q8IU68 726 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 ARHGEF19Q8IW93 802 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 FUKQ8N0W3 1084 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 SLC4A11Q8NBS3 891 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 ANKRD20A12PQ8NF67 263 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 SLC2A14Q8TDB8 520 aa15.42■□□□□ 0.06
SQSTM1-205ENST00000464493 FGF13Q92913 245 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms