RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 HHIPQ96QV1 700 aa18.6■□□□□ 0.57
HMGN1-210ENST00000464078 PKMYT1Q99640 499 aa18.6■□□□□ 0.57
HMGN1-210ENST00000464078 ACBD6Q9BR61 282 aa18.6■□□□□ 0.57
HMGN1-210ENST00000464078 STRA6Q9BX79 667 aa18.6■□□□□ 0.57
HMGN1-210ENST00000464078 DUSP15Q9H1R2 295 aaPredicted RBP18.6■□□□□ 0.57
HMGN1-210ENST00000464078 ECT2Q9H8V3 914 aa18.6■□□□□ 0.57
HMGN1-210ENST00000464078 CACNA1GO43497 2377 aa18.6■□□□□ 0.57
HMGN1-210ENST00000464078 PRPF40AO75400 957 aaKnown RBP18.59■□□□□ 0.57
HMGN1-210ENST00000464078 KCNK5O95279 499 aa18.59■□□□□ 0.57
HMGN1-210ENST00000464078 APBB3O95704 486 aa18.59■□□□□ 0.57
HMGN1-210ENST00000464078 GPR15P49685 360 aa18.59■□□□□ 0.57
HMGN1-210ENST00000464078 RABEP1Q15276 862 aa18.59■□□□□ 0.57
HMGN1-210ENST00000464078 ELF2Q15723 593 aa18.59■□□□□ 0.57
HMGN1-210ENST00000464078 CFAP221Q4G0U5 840 aa18.59■□□□□ 0.57
HMGN1-210ENST00000464078 INTS6LQ5JSJ4 861 aaKnown RBP18.59■□□□□ 0.57
HMGN1-210ENST00000464078 ZNF720Q7Z2F6 126 aa18.59■□□□□ 0.57
HMGN1-210ENST00000464078 BRSK2Q8IWQ3 736 aa18.59■□□□□ 0.57
HMGN1-210ENST00000464078 LRRC52Q8N7C0 313 aa18.59■□□□□ 0.57
HMGN1-210ENST00000464078 RASSF8Q8NHQ8 419 aa18.59■□□□□ 0.57
HMGN1-210ENST00000464078 POMGNT1Q8WZA1 660 aa18.59■□□□□ 0.57
HMGN1-210ENST00000464078 ATP2A3Q93084 1043 aa18.59■□□□□ 0.57
HMGN1-210ENST00000464078 PI4K2AQ9BTU6 479 aa18.59■□□□□ 0.57
HMGN1-210ENST00000464078 SEL1LQ9UBV2 794 aa18.59■□□□□ 0.57
HMGN1-210ENST00000464078 L1RE1Q9UN81 338 aa18.59■□□□□ 0.57
HMGN1-210ENST00000464078 MAGED2Q9UNF1 606 aaPredicted RBP18.59■□□□□ 0.57
HMGN1-210ENST00000464078 NUP205Q92621 2012 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 USP17L7P0C7H9 530 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 TCF3P15923 654 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 GJB2P29033 226 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 GRIN1Q05586 938 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 EML3Q32P44 896 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 RNF43Q68DV7 783 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 NAIF1Q69YI7 327 aaPredicted RBP18.58■□□□□ 0.56
HMGN1-210ENST00000464078 SFR1Q86XK3 245 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 KRI1Q8N9T8 703 aaKnown RBP18.58■□□□□ 0.56
HMGN1-210ENST00000464078 STKLD1Q8NE28 680 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 RPLP0P6Q8NHW5 317 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 CCDC26Q8TAB7 109 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 CXorf38Q8TB03 319 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 CD101Q93033 1021 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 FUBP3Q96I24 572 aaKnown RBP eCLIP18.58■□□□□ 0.56
HMGN1-210ENST00000464078 IKZF4Q9H2S9 585 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 SMOC1Q9H4F8 434 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 POLR3BQ9NW08 1133 aaPredicted RBP18.58■□□□□ 0.56
HMGN1-210ENST00000464078 GDAP2Q9NXN4 497 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 DDX43Q9NXZ2 648 aaKnown RBP18.58■□□□□ 0.56
HMGN1-210ENST00000464078 ATRXP46100 2492 aa18.58■□□□□ 0.56
HMGN1-210ENST00000464078 TRAV19A0A0A6YYK7 116 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 BCLAF3A2AJT9 711 aaKnown RBP18.57■□□□□ 0.56
HMGN1-210ENST00000464078 RHOBTB1O94844 696 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 ITGB3P05106 788 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 CKMP06732 381 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 CYP2F1P24903 491 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 POLR2BP30876 1174 aaKnown RBP18.57■□□□□ 0.56
HMGN1-210ENST00000464078 DDIT3P35638 169 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 WNT7BP56706 349 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 MYL7Q01449 175 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 DMC1Q14565 340 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 DDR2Q16832 855 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 SDHAF4Q5VUM1 108 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 TCEAL6Q6IPX3 200 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 BRAPQ7Z569 592 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 C11orf74Q86VG3 221 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 C1orf127Q8N9H9 656 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 TCEAL3Q969E4 200 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 TMX3Q96JJ7 454 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 SLC22A12Q96S37 553 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 DUS2Q9NX74 493 aaKnown RBP18.57■□□□□ 0.56
HMGN1-210ENST00000464078 STK17AQ9UEE5 414 aa18.57■□□□□ 0.56
HMGN1-210ENST00000464078 PKD1L2Q7Z442 2459 aa18.56■□□□□ 0.56
HMGN1-210ENST00000464078 HUS1O60921 280 aa18.56■□□□□ 0.56
HMGN1-210ENST00000464078 IFNAR2P48551 515 aa18.56■□□□□ 0.56
HMGN1-210ENST00000464078 TFAMQ00059 246 aaKnown RBP18.56■□□□□ 0.56
HMGN1-210ENST00000464078 TOP6BLQ8N6T0 577 aa18.56■□□□□ 0.56
HMGN1-210ENST00000464078 EDEM2Q9BV94 578 aa18.56■□□□□ 0.56
HMGN1-210ENST00000464078 TRPC7Q9HCX4 862 aa18.56■□□□□ 0.56
HMGN1-210ENST00000464078 GCNT4Q9P109 453 aa18.56■□□□□ 0.56
HMGN1-210ENST00000464078 ITGA11Q9UKX5 1188 aa18.56■□□□□ 0.56
HMGN1-210ENST00000464078 EXOC7Q9UPT5 735 aa18.56■□□□□ 0.56
HMGN1-210ENST00000464078 WNT6Q9Y6F9 365 aa18.56■□□□□ 0.56
HMGN1-210ENST00000464078 PTPRDP23468 1912 aa18.55■□□□□ 0.56
HMGN1-210ENST00000464078 GABRDO14764 452 aa18.55■□□□□ 0.56
HMGN1-210ENST00000464078 GAP43P17677 238 aa18.55■□□□□ 0.56
HMGN1-210ENST00000464078 ACAT1P24752 427 aaKnown RBP18.55■□□□□ 0.56
HMGN1-210ENST00000464078 PCSK1P29120 753 aa18.55■□□□□ 0.56
HMGN1-210ENST00000464078 MAGEA11P43364 429 aa18.55■□□□□ 0.56
HMGN1-210ENST00000464078 L1TD1Q5T7N2 865 aaKnown RBP18.55■□□□□ 0.56
HMGN1-210ENST00000464078 PMS2CLQ68D20 193 aa18.55■□□□□ 0.56
HMGN1-210ENST00000464078 FSIP1Q8NA03 581 aa18.55■□□□□ 0.56
HMGN1-210ENST00000464078 CACTINQ8WUQ7 758 aaKnown RBP18.55■□□□□ 0.56
HMGN1-210ENST00000464078 CEP295NLQ96MC4 621 aa18.55■□□□□ 0.56
HMGN1-210ENST00000464078 FAM213AQ9BRX8 229 aa18.55■□□□□ 0.56
HMGN1-210ENST00000464078 OLFML3Q9NRN5 406 aa18.55■□□□□ 0.56
HMGN1-210ENST00000464078 GTF3C4Q9UKN8 822 aa18.55■□□□□ 0.56
HMGN1-210ENST00000464078 ARHGAP26Q9UNA1 814 aa18.55■□□□□ 0.56
HMGN1-210ENST00000464078 AGAP1Q9UPQ3 857 aa18.55■□□□□ 0.56
HMGN1-210ENST00000464078 LNP1A1A4G5 178 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 CAVIN2O95810 425 aa18.54■□□□□ 0.56
HMGN1-210ENST00000464078 LDHAP00338 332 aaKnown RBP18.54■□□□□ 0.56
HMGN1-210ENST00000464078 PFKLP17858 780 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms