RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 MAP3K13O43283 966 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 ALDH1A2O94788 518 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 CKMP06732 381 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 RDXP35241 583 aaKnown RBP15.59■□□□□ 0.09
SMC1A-204ENST00000463684 GPR15P49685 360 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 ACOT2P49753 483 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 SEC13P55735 322 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 ZNF77Q15935 545 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 EML3Q32P44 896 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 SV2CQ496J9 727 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 C2orf27AQ580R0 203 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 RASSF3Q86WH2 238 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 TTC30AQ86WT1 665 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 FSIP1Q8NA03 581 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 USP33Q8TEY7 942 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 CNOT6LQ96LI5 555 aaKnown RBP15.59■□□□□ 0.09
SMC1A-204ENST00000463684 PNMA5Q96PV4 448 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 CCSER1Q9C0I3 900 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 EVLQ9UI08 416 aaPredicted RBP15.59■□□□□ 0.09
SMC1A-204ENST00000463684 LHX6Q9UPM6 363 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 NEUROG3Q9Y4Z2 214 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 SPAG17Q6Q759 2223 aa15.59■□□□□ 0.09
SMC1A-204ENST00000463684 FAM13AO94988 1023 aa15.58■□□□□ 0.08
SMC1A-204ENST00000463684 BCKDHBP21953 392 aa15.58■□□□□ 0.08
SMC1A-204ENST00000463684 ABCD1P33897 745 aa15.58■□□□□ 0.08
SMC1A-204ENST00000463684 RING1Q06587 406 aa15.58■□□□□ 0.08
SMC1A-204ENST00000463684 DDR2Q16832 855 aa15.58■□□□□ 0.08
SMC1A-204ENST00000463684 TRIM61Q5EBN2 209 aa15.58■□□□□ 0.08
SMC1A-204ENST00000463684 ARSHQ5FYA8 562 aa15.58■□□□□ 0.08
SMC1A-204ENST00000463684 SDHAF4Q5VUM1 108 aa15.58■□□□□ 0.08
SMC1A-204ENST00000463684 ADALQ6DHV7 355 aa15.58■□□□□ 0.08
SMC1A-204ENST00000463684 KIAA1211LQ6NV74 962 aa15.58■□□□□ 0.08
SMC1A-204ENST00000463684 LPCAT2Q7L5N7 544 aa15.58■□□□□ 0.08
SMC1A-204ENST00000463684 EFCAB13Q8IY85 973 aa15.58■□□□□ 0.08
SMC1A-204ENST00000463684 STKLD1Q8NE28 680 aa15.58■□□□□ 0.08
SMC1A-204ENST00000463684 TRMT2BQ96GJ1 504 aaKnown RBP15.58■□□□□ 0.08
SMC1A-204ENST00000463684 TMLHEQ9NVH6 421 aa15.58■□□□□ 0.08
SMC1A-204ENST00000463684 CIZ1Q9ULV3 898 aaPredicted RBP15.58■□□□□ 0.08
SMC1A-204ENST00000463684 MMP17Q9ULZ9 603 aa15.58■□□□□ 0.08
SMC1A-204ENST00000463684 HYAL3O43820 417 aaPredicted RBP15.57■□□□□ 0.08
SMC1A-204ENST00000463684 TRAK2O60296 914 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 NFATC1O95644 943 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 PNPLA4P41247 253 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 CRY1Q16526 586 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 SLFN12LQ6IEE8 588 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 CCDC33Q8N5R6 958 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 ARL14EPQ8N8R7 260 aaPredicted RBP15.57■□□□□ 0.08
SMC1A-204ENST00000463684 MDGA1Q8NFP4 955 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 SH3RF2Q8TEC5 729 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 LEO1Q8WVC0 666 aaPredicted RBP15.57■□□□□ 0.08
SMC1A-204ENST00000463684 SPACA7Q96KW9 195 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 MYRFLQ96LU7 910 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 ZNF560Q96MR9 790 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 SLC22A12Q96S37 553 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 REEP2Q9BRK0 252 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 LINC00597Q9H2U6 94 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 PARVGQ9HBI0 331 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 ABCB6Q9NP58 842 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.57■□□□□ 0.08
SMC1A-204ENST00000463684 MSRB2Q9Y3D2 182 aa15.57■□□□□ 0.08
SMC1A-204ENST00000463684 K7EQS6 105 aa15.56■□□□□ 0.08
SMC1A-204ENST00000463684 TULP1O00294 542 aaPredicted RBP15.56■□□□□ 0.08
SMC1A-204ENST00000463684 TNFRSF10BO14763 440 aa15.56■□□□□ 0.08
SMC1A-204ENST00000463684 NOL4O94818 638 aa15.56■□□□□ 0.08
SMC1A-204ENST00000463684 KRT18P05783 430 aaKnown RBP15.56■□□□□ 0.08
SMC1A-204ENST00000463684 HDCP19113 662 aa15.56■□□□□ 0.08
SMC1A-204ENST00000463684 CYP2F1P24903 491 aa15.56■□□□□ 0.08
SMC1A-204ENST00000463684 DPP6P42658 865 aa15.56■□□□□ 0.08
SMC1A-204ENST00000463684 MAPK8P45983 427 aa15.56■□□□□ 0.08
SMC1A-204ENST00000463684 PDE6CP51160 858 aa15.56■□□□□ 0.08
SMC1A-204ENST00000463684 MRPS21P82921 87 aaKnown RBP15.56■□□□□ 0.08
SMC1A-204ENST00000463684 USP4Q13107 963 aa15.56■□□□□ 0.08
SMC1A-204ENST00000463684 BYSLQ13895 437 aaKnown RBP15.56■□□□□ 0.08
SMC1A-204ENST00000463684 DHX8Q14562 1220 aaKnown RBP15.56■□□□□ 0.08
SMC1A-204ENST00000463684 KCNB1Q14721 858 aa15.56■□□□□ 0.08
SMC1A-204ENST00000463684 LMBRD2Q68DH5 695 aaPredicted RBP15.56■□□□□ 0.08
SMC1A-204ENST00000463684 SLC39A4Q6P5W5 647 aa15.56■□□□□ 0.08
SMC1A-204ENST00000463684 GPBP1Q86WP2 473 aa15.56■□□□□ 0.08
SMC1A-204ENST00000463684 SYT12Q8IV01 421 aa15.56■□□□□ 0.08
SMC1A-204ENST00000463684 ACBD6Q9BR61 282 aa15.56■□□□□ 0.08
SMC1A-204ENST00000463684 ZHX3Q9H4I2 956 aa15.56■□□□□ 0.08
SMC1A-204ENST00000463684 AGO2Q9UKV8 859 aaKnown RBP15.56■□□□□ 0.08
SMC1A-204ENST00000463684 EML5Q05BV3 1969 aa15.55■□□□□ 0.08
SMC1A-204ENST00000463684 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.55■□□□□ 0.08
SMC1A-204ENST00000463684 VWA3AA6NCI4 1184 aa15.55■□□□□ 0.08
SMC1A-204ENST00000463684 MYMKA6NI61 221 aa15.55■□□□□ 0.08
SMC1A-204ENST00000463684 ANKRD63C9JTQ0 380 aa15.55■□□□□ 0.08
SMC1A-204ENST00000463684 HUS1O60921 280 aa15.55■□□□□ 0.08
SMC1A-204ENST00000463684 TADA3O75528 432 aa15.55■□□□□ 0.08
SMC1A-204ENST00000463684 ENGP17813 658 aa15.55■□□□□ 0.08
SMC1A-204ENST00000463684 ATXN3P54252 364 aaPredicted RBP15.55■□□□□ 0.08
SMC1A-204ENST00000463684 SIM1P81133 766 aaPredicted RBP15.55■□□□□ 0.08
SMC1A-204ENST00000463684 ATP2C1P98194 919 aaPredicted RBP15.55■□□□□ 0.08
SMC1A-204ENST00000463684 MYL7Q01449 175 aa15.55■□□□□ 0.08
SMC1A-204ENST00000463684 POU5F1Q01860 360 aaKnown RBP15.55■□□□□ 0.08
SMC1A-204ENST00000463684 TMEM119Q4V9L6 283 aa15.55■□□□□ 0.08
SMC1A-204ENST00000463684 NT5DC4Q86YG4 428 aa15.55■□□□□ 0.08
SMC1A-204ENST00000463684 SPATA2LQ8IUW3 424 aaPredicted RBP15.55■□□□□ 0.08
SMC1A-204ENST00000463684 TMEFF1Q8IYR6 380 aa15.55■□□□□ 0.08
SMC1A-204ENST00000463684 OLIG1Q8TAK6 271 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms