RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 SERTAD1Q9UHV2 236 aa23.75■■□□□ 1.39
PDLIM7-206ENST00000463411 CDH9Q9ULB4 789 aa23.75■■□□□ 1.39
PDLIM7-206ENST00000463411 PCDHGA2Q9Y5H1 932 aa23.75■■□□□ 1.39
PDLIM7-206ENST00000463411 SOBPA7XYQ1 873 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 F11P03951 625 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 MTAPQ13126 283 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 FZD5Q13467 585 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 LRRC32Q14392 662 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 KNOP1Q1ED39 458 aaKnown RBP23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 C12orf56Q8IXR9 622 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 GRAMD1CQ8IYS0 662 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 ZNF687Q8N1G0 1237 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 MAB21L3Q8N8X9 362 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 ATRIPQ8WXE1 791 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 TRMT2BQ96GJ1 504 aaKnown RBP23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 SPATA32Q96LK8 384 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 HINFPQ9BQA5 517 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 SLC46A2Q9BY10 475 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 KIF9Q9HAQ2 790 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 LMAN1LQ9HAT1 526 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 PRMT8Q9NR22 394 aaPredicted RBP23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 USP25Q9UHP3 1055 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 FAM186AA6NE01 2351 aa23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 KIF26AQ9ULI4 1882 aaPredicted RBP23.74■■□□□ 1.39
PDLIM7-206ENST00000463411 EXOC3O60645 756 aa23.73■■□□□ 1.39
PDLIM7-206ENST00000463411 NOL4O94818 638 aa23.73■■□□□ 1.39
PDLIM7-206ENST00000463411 WARSP23381 471 aaKnown RBP23.73■■□□□ 1.39
PDLIM7-206ENST00000463411 TNNC1P63316 161 aa23.73■■□□□ 1.39
PDLIM7-206ENST00000463411 SDHAF4Q5VUM1 108 aa23.73■■□□□ 1.39
PDLIM7-206ENST00000463411 TMEM150AQ86TG1 271 aa23.73■■□□□ 1.39
PDLIM7-206ENST00000463411 RALGPS2Q86X27 583 aaPredicted RBP23.73■■□□□ 1.39
PDLIM7-206ENST00000463411 SCN4BQ8IWT1 228 aa23.73■■□□□ 1.39
PDLIM7-206ENST00000463411 STKLD1Q8NE28 680 aa23.73■■□□□ 1.39
PDLIM7-206ENST00000463411 KBTBD7Q8WVZ9 684 aa23.73■■□□□ 1.39
PDLIM7-206ENST00000463411 ZFYVE19Q96K21 471 aa23.73■■□□□ 1.39
PDLIM7-206ENST00000463411 SMG9Q9H0W8 520 aaKnown RBP23.73■■□□□ 1.39
PDLIM7-206ENST00000463411 MAGEC2Q9UBF1 373 aaPredicted RBP23.73■■□□□ 1.39
PDLIM7-206ENST00000463411 F5P12259 2224 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 RIF1Q5UIP0 2472 aaKnown RBP23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 VPS13AQ96RL7 3174 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 MYBPHLA2RUH7 354 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 SPECC1L-ADORA2AF8WAN1 911 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 HCRTO43612 131 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 ACTN4O43707 911 aaKnown RBP23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 PFKFB1P16118 471 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 MAGEA11P43364 429 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 SOX9P48436 509 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 CCR3P51677 355 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 PSMC1P62191 440 aaKnown RBP23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 TRPC3Q13507 836 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 LIMS2Q7Z4I7 341 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 MYLPFQ96A32 169 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 LRRC3BQ96PB8 259 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 FAM126AQ9BYI3 521 aaPredicted RBP23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 SNX25Q9H3E2 840 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 ZSCAN32Q9NX65 697 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 GTSE1Q9NYZ3 720 aa23.72■■□□□ 1.39
PDLIM7-206ENST00000463411 CLSTN1O94985 981 aa23.71■■□□□ 1.39
PDLIM7-206ENST00000463411 MYL1P05976 194 aa23.71■■□□□ 1.39
PDLIM7-206ENST00000463411 CMA1P23946 247 aa23.71■■□□□ 1.39
PDLIM7-206ENST00000463411 CTHP32929 405 aa23.71■■□□□ 1.39
PDLIM7-206ENST00000463411 PSMD2Q13200 908 aa23.71■■□□□ 1.39
PDLIM7-206ENST00000463411 CCDC142Q17RM4 750 aa23.71■■□□□ 1.39
PDLIM7-206ENST00000463411 TXNDC8Q6A555 127 aa23.71■■□□□ 1.39
PDLIM7-206ENST00000463411 FAM171BQ6P995 826 aa23.71■■□□□ 1.39
PDLIM7-206ENST00000463411 MON1AQ86VX9 555 aa23.71■■□□□ 1.39
PDLIM7-206ENST00000463411 FSIP1Q8NA03 581 aa23.71■■□□□ 1.39
PDLIM7-206ENST00000463411 TTC8Q8TAM2 541 aa23.71■■□□□ 1.39
PDLIM7-206ENST00000463411 PAGE5Q96GU1 130 aa23.71■■□□□ 1.39
PDLIM7-206ENST00000463411 GBP4Q96PP9 640 aa23.71■■□□□ 1.39
PDLIM7-206ENST00000463411 TDP1Q9NUW8 608 aa23.71■■□□□ 1.39
PDLIM7-206ENST00000463411 PTPRZ1P23471 2315 aaPredicted RBP23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 A0A1B0GVL5 298 aa23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 PHACTR2O75167 634 aa23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 ATP2C2O75185 946 aa23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 CHRNB1P11230 501 aa23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 LMO2P25791 158 aa23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 ANXA13P27216 316 aa23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 CYP27A1Q02318 531 aa23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 ITPRIPL2Q3MIP1 535 aa23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 CC2D1AQ6P1N0 951 aaPredicted RBP23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 TSSK4Q6SA08 328 aa23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 VSTM1Q6UX27 236 aa23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 MAMSTRQ6ZN01 415 aa23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 CHAMP1Q96JM3 812 aa23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 MYRFLQ96LU7 910 aa23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 TRPC7Q9HCX4 862 aa23.7■■□□□ 1.38
PDLIM7-206ENST00000463411 PTPRDP23468 1912 aa23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 KLRC4O43908 158 aa23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 TACC1O75410 805 aa23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 PDGFRBP09619 1106 aa23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 ATICP31939 592 aa23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 NRLP54845 237 aa23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 TNK2Q07912 1038 aa23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 BIRC3Q13489 604 aa23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 ZNF268Q14587 947 aaPredicted RBP23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 WDR72Q3MJ13 1102 aa23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 DGKKQ5KSL6 1271 aa23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 ZBTB44Q8NCP5 570 aa23.69■■□□□ 1.38
PDLIM7-206ENST00000463411 OR6B3Q8NGW1 331 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms