RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 RGMBQ6NW40 437 aa9.16□□□□□ -0.94
SHQ1-203ENST00000463369 DPY19L2P1Q6NXN4 242 aa9.16□□□□□ -0.94
SHQ1-203ENST00000463369 C4orf50Q6ZRC1 276 aa9.16□□□□□ -0.94
SHQ1-203ENST00000463369 ARHGEF18Q6ZSZ5 1173 aa9.16□□□□□ -0.94
SHQ1-203ENST00000463369 APPL2Q8NEU8 664 aa9.16□□□□□ -0.94
SHQ1-203ENST00000463369 REPS2Q8NFH8 660 aa9.16□□□□□ -0.94
SHQ1-203ENST00000463369 ART4Q93070 314 aa9.16□□□□□ -0.94
SHQ1-203ENST00000463369 HAPLN3Q96S86 360 aa9.16□□□□□ -0.94
SHQ1-203ENST00000463369 AASDHPPTQ9NRN7 309 aa9.16□□□□□ -0.94
SHQ1-203ENST00000463369 MRGBPQ9NV56 204 aa9.16□□□□□ -0.94
SHQ1-203ENST00000463369 STK17AQ9UEE5 414 aa9.16□□□□□ -0.94
SHQ1-203ENST00000463369 ARMCX3Q9UH62 379 aaPredicted RBP9.16□□□□□ -0.94
SHQ1-203ENST00000463369 PCYOX1Q9UHG3 505 aa9.16□□□□□ -0.94
SHQ1-203ENST00000463369 GMEB1Q9Y692 573 aa9.16□□□□□ -0.94
SHQ1-203ENST00000463369 MGAMO43451 1857 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 PFASO15067 1338 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 CETN3O15182 167 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 MAGEB2O15479 319 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 PHF2O75151 1096 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 DCTN3O75935 186 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 CYP1A1P04798 512 aaPredicted RBP9.15□□□□□ -0.94
SHQ1-203ENST00000463369 PTPN4P29074 926 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 CHRNA3P32297 505 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 FOXN2P32314 431 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 ZNF157P51786 506 aaPredicted RBP9.15□□□□□ -0.94
SHQ1-203ENST00000463369 OAZ1P54368 228 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 SESN3P58005 492 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 SLC34A1Q06495 639 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 STRN3Q13033 797 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 USH1GQ495M9 461 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 ZC2HC1CQ53FD0 456 aaPredicted RBP9.15□□□□□ -0.94
SHQ1-203ENST00000463369 TRAF7Q6Q0C0 670 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 LBX2Q6XYB7 198 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 ZC3H18Q86VM9 953 aaKnown RBP9.15□□□□□ -0.94
SHQ1-203ENST00000463369 RASAL3Q86YV0 1011 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 MYLK4Q86YV6 388 aaPredicted RBP9.15□□□□□ -0.94
SHQ1-203ENST00000463369 ALKBH8Q96BT7 664 aaKnown RBP9.15□□□□□ -0.94
SHQ1-203ENST00000463369 C18orf8Q96DM3 657 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 ATG4CQ96DT6 458 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 HHIPL1Q96JK4 782 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 NR1H4Q96RI1 486 aaPredicted RBP9.15□□□□□ -0.94
SHQ1-203ENST00000463369 CITED4Q96RK1 184 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 NUDT12Q9BQG2 462 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 CCDC28BQ9BUN5 200 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 SARGQ9BW04 601 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 GLT8D2Q9H1C3 349 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 LARSQ9P2J5 1176 aaKnown RBP9.15□□□□□ -0.94
SHQ1-203ENST00000463369 ZNF510Q9Y2H8 683 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 PTCH2Q9Y6C5 1203 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 COMMD3-BMI1R4GMX3 469 aa9.15□□□□□ -0.94
SHQ1-203ENST00000463369 PLXNB2O15031 1838 aa9.15□□□□□ -0.95
SHQ1-203ENST00000463369 WDR81Q562E7 1941 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 ACTN1P12814 892 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 KRT13P13646 458 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 UCHL3P15374 230 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 FOSL1P15407 271 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 ABCD1P33897 745 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 ADCY7P51828 1080 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 GALCP54803 685 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 AP1B1Q10567 949 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 MZT2AQ6P582 158 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 LRRC74BQ6ZQY2 392 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 VPS36Q86VN1 386 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 STKLD1Q8NE28 680 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 SLC35G2Q8TBE7 412 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 LARP4BQ92615 738 aaKnown RBP9.14□□□□□ -0.95
SHQ1-203ENST00000463369 PNMA5Q96PV4 448 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 NT5C3AQ9H0P0 336 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 ASCC2Q9H1I8 757 aaPredicted RBP9.14□□□□□ -0.95
SHQ1-203ENST00000463369 CAAP1Q9H8G2 361 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 PSTPIP2Q9H939 334 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 DDX43Q9NXZ2 648 aaKnown RBP9.14□□□□□ -0.95
SHQ1-203ENST00000463369 NKIRAS1Q9NYS0 192 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 LNPEPQ9UIQ6 1025 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 ZNF180Q9UJW8 692 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 MAFFQ9ULX9 164 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 FAM50BQ9Y247 325 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 CCL15-CCL14A0A0B4J2E2 113 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 FOXO6A8MYZ6 492 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 DDX3XO00571 662 aaKnown RBP eCLIP9.14□□□□□ -0.95
SHQ1-203ENST00000463369 ATP2A1O14983 1001 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 CCNT1O60563 726 aaKnown RBP9.14□□□□□ -0.95
SHQ1-203ENST00000463369 BAIAP3O94812 1187 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 ALAS1P13196 640 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 HSPA6P17066 643 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 SLC9A1P19634 815 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 STT3AP46977 705 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 EIF1AXP47813 144 aaKnown RBP9.14□□□□□ -0.95
SHQ1-203ENST00000463369 IL9RQ01113 521 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 RCN1Q15293 331 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 CCL15Q16663 113 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 ZNF449Q6P9G9 518 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 PPP1R21Q6ZMI0 780 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 CYFIP1Q7L576 1253 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 EEPD1Q7L9B9 569 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 ERMP1Q7Z2K6 904 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 RNF180Q86T96 592 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 NELFCDQ8IXH7 590 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 PRELID2Q8N945 189 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 PPFIBP2Q8ND30 876 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms