RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 TSPY1Q01534 308 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 GPR17Q13304 367 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 MAPRE1Q15691 268 aaKnown RBP15.22■□□□□ 0.03
COL6A1-202ENST00000463060 PSMD5Q16401 504 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 CLEC16AQ2KHT3 1053 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 MDH1BQ5I0G3 518 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 TRIM72Q6ZMU5 477 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 TTC30AQ86WT1 665 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 ANKRD52Q8NB46 1076 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 FBXO22Q8NEZ5 403 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 PCED1BQ96HM7 432 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 SPTLC3Q9NUV7 552 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 TMEM30AQ9NV96 361 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 PUF60Q9UHX1 559 aaKnown RBP15.22■□□□□ 0.03
COL6A1-202ENST00000463060 CYTH4Q9UIA0 394 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 MSRAQ9UJ68 235 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 TSPAN16Q9UKR8 245 aa15.22■□□□□ 0.03
COL6A1-202ENST00000463060 A0A1W2PPC1 479 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 CLDN5O00501 218 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 FSCN2O14926 492 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 GRM6O15303 877 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 AKR1B10O60218 316 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 ABLIM3O94929 683 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 LSM8O95777 96 aaKnown RBP15.21■□□□□ 0.03
COL6A1-202ENST00000463060 SSTR3P32745 418 aaPredicted RBP15.21■□□□□ 0.03
COL6A1-202ENST00000463060 CYLC1P35663 651 aaPredicted RBP15.21■□□□□ 0.03
COL6A1-202ENST00000463060 NOMO3P69849 1222 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 GFPT1Q06210 699 aaPredicted RBP15.21■□□□□ 0.03
COL6A1-202ENST00000463060 SMARCB1Q12824 385 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 PTPN14Q15678 1187 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 HABP4Q5JVS0 413 aaKnown RBP15.21■□□□□ 0.03
COL6A1-202ENST00000463060 KIAA1841Q6NSI8 718 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 ALKBH5Q6P6C2 394 aaKnown RBP15.21■□□□□ 0.03
COL6A1-202ENST00000463060 DCP1BQ8IZD4 617 aaKnown RBP15.21■□□□□ 0.03
COL6A1-202ENST00000463060 SLC2A14Q8TDB8 520 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 SLC35F5Q8WV83 523 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 POF1BQ8WVV4 589 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 AUTS2Q8WXX7 1259 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 C11orf84Q9BUA3 381 aaPredicted RBP15.21■□□□□ 0.03
COL6A1-202ENST00000463060 ZNF518BQ9C0D4 1074 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 CSNK1G1Q9HCP0 422 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 TAS2R14Q9NYV8 317 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.21■□□□□ 0.03
COL6A1-202ENST00000463060 ADGRG1Q9Y653 693 aa15.21■□□□□ 0.03
COL6A1-202ENST00000463060 PTPRDP23468 1912 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 GABBR2O75899 941 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 URODP06132 367 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 RPL17P18621 184 aaKnown RBP15.2■□□□□ 0.02
COL6A1-202ENST00000463060 DNAJB2P25686 324 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 OR1D2P34982 312 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 RPL34P49207 117 aaKnown RBP15.2■□□□□ 0.02
COL6A1-202ENST00000463060 CYP27A1Q02318 531 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 CENPCQ03188 943 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 PTP4A2Q12974 167 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 RAB33AQ14088 237 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 GOLGA7BQ2TAP0 167 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 LRIT3Q3SXY7 679 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 CFAP221Q4G0U5 840 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 SLC39A12Q504Y0 691 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 ACAD10Q6JQN1 1059 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 TOGARAM2Q6ZUX3 1019 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 FAM35AQ86V20 835 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 VPS36Q86VN1 386 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 MRPL43Q8N983 215 aaKnown RBP15.2■□□□□ 0.02
COL6A1-202ENST00000463060 UBA3Q8TBC4 463 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 STK32AQ8WU08 396 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 MYLPFQ96A32 169 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 SMOQ99835 787 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.2■□□□□ 0.02
COL6A1-202ENST00000463060 DUSP16Q9BY84 665 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 UBXN6Q9BZV1 441 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.2■□□□□ 0.02
COL6A1-202ENST00000463060 MRPL17Q9NRX2 175 aaKnown RBP15.2■□□□□ 0.02
COL6A1-202ENST00000463060 PYCARDQ9ULZ3 195 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 SSX2IPQ9Y2D8 614 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 CDY1Q9Y6F8 540 aa15.2■□□□□ 0.02
COL6A1-202ENST00000463060 WDR27A2RRH5 827 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 C2CD2LO14523 706 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 NRDCO43847 1150 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 RTN2O75298 545 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 BEST1O76090 585 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 CXCL14O95715 111 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 CACNA2D1P54289 1103 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 ROR1Q01973 937 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 PDE4CQ08493 712 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 GPM6BQ13491 265 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 NFE2Q16621 373 aaPredicted RBP15.19■□□□□ 0.02
COL6A1-202ENST00000463060 CCDC122Q5T0U0 273 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 C10orf76Q5T2E6 689 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 RNF19BQ6ZMZ0 732 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 PHF13Q86YI8 300 aaPredicted RBP15.19■□□□□ 0.02
COL6A1-202ENST00000463060 PASD1Q8IV76 773 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 TMEM35BQ8NCS4 154 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 ZMIZ2Q8NF64 920 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 FUBP3Q96I24 572 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL6A1-202ENST00000463060 DEF6Q9H4E7 631 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 SLC28A3Q9HAS3 691 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 ABCB6Q9NP58 842 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 MTUS1Q9ULD2 1270 aa15.19■□□□□ 0.02
COL6A1-202ENST00000463060 MTMR11A4FU01 709 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms