RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 FAM193AP78312 1265 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 USP4Q13107 963 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 STK3Q13188 491 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 ZNF268Q14587 947 aaPredicted RBP8.38□□□□□ -1.07
SMC3-202ENST00000462899 GAB4Q2WGN9 574 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 ARHGAP15Q53QZ3 475 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 SLC23A3Q6PIS1 610 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 CPLX2Q6PUV4 134 aaKnown RBP8.38□□□□□ -1.07
SMC3-202ENST00000462899 CYP2U1Q7Z449 544 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 ITIH5Q86UX2 942 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 MDGA1Q8NFP4 955 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 ZBTB45Q96K62 511 aaPredicted RBP8.38□□□□□ -1.07
SMC3-202ENST00000462899 IFT74Q96LB3 600 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 P2RY13Q9BPV8 354 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 MRPL4Q9BYD3 311 aaKnown RBP8.38□□□□□ -1.07
SMC3-202ENST00000462899 TPSD1Q9BZJ3 242 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 HAPLN2Q9GZV7 340 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 KIF9Q9HAQ2 790 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 TMEM74BQ9NUR3 256 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 THG1LQ9NWX6 298 aaKnown RBP8.38□□□□□ -1.07
SMC3-202ENST00000462899 MYO18BQ8IUG5 2567 aa8.38□□□□□ -1.07
SMC3-202ENST00000462899 PTPRQQ9UMZ3 2332 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 ARHGEF35A5YM69 484 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 H0Y626 953 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 TNFRSF10BO14763 440 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 FAM189A1O60320 539 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 CDKL5O76039 1030 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 TRIM16O95361 564 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 CYP11A1P05108 521 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 CXCL8P10145 99 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 ENGP17813 658 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 XBP1P17861 261 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 DDX6P26196 483 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMC3-202ENST00000462899 GBP1P32455 592 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 GGCXP38435 758 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 P2RY2P41231 377 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 DGKEP52429 567 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 SIM1P81133 766 aaPredicted RBP8.37□□□□□ -1.07
SMC3-202ENST00000462899 LMAN2Q12907 356 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 NOLC1Q14978 699 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMC3-202ENST00000462899 ZNF77Q15935 545 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 COL28A1Q2UY09 1125 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 TRIM61Q5EBN2 209 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 OVOS1Q6IE37 1185 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 USP33Q8TEY7 942 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 KCNN1Q92952 543 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 CD101Q93033 1021 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 FNBP1Q96RU3 617 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 TM6SF1Q9BZW5 370 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 ZCWPW1Q9H0M4 648 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 ECT2Q9H8V3 914 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 TDP1Q9NUW8 608 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 INVSQ9Y283 1065 aa8.37□□□□□ -1.07
SMC3-202ENST00000462899 GOLGA4Q13439 2230 aaKnown RBP8.37□□□□□ -1.07
SMC3-202ENST00000462899 BSNQ9UPA5 3926 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 MUC22E2RYF6 1773 aaPredicted RBP8.36□□□□□ -1.07
SMC3-202ENST00000462899 TP53BP1Q12888 1972 aaPredicted RBP8.36□□□□□ -1.07
SMC3-202ENST00000462899 BTBD18B2RXH4 712 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 K7EQS6 105 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 EPB41L2O43491 1005 aaKnown RBP8.36□□□□□ -1.07
SMC3-202ENST00000462899 PFKFB2O60825 505 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 TOM1L1O75674 476 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 GJB3O75712 270 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 TCF3P15923 654 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 MARCKSP29966 332 aaPredicted RBP8.36□□□□□ -1.07
SMC3-202ENST00000462899 NMT1P30419 496 aaKnown RBP8.36□□□□□ -1.07
SMC3-202ENST00000462899 OPRD1P41143 372 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 PTGER3P43115 390 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 PEX3P56589 373 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 NLRP12P59046 1061 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 LILRA4P59901 499 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 AMPD2Q01433 879 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 MCL1Q07820 350 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 SCAPQ12770 1279 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 PDGFRLQ15198 375 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 EML3Q32P44 896 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 UAP1L1Q3KQV9 507 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 MSS51Q4VC12 460 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 SEZ6Q53EL9 994 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 USP39Q53GS9 565 aaKnown RBP8.36□□□□□ -1.07
SMC3-202ENST00000462899 SPDYCQ5MJ68 293 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 C19orf48Q6RUI8 117 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 SYT12Q8IV01 421 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 CHCHD4Q8N4Q1 142 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 MAB21L3Q8N8X9 362 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 TSTD1Q8NFU3 115 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 ADAM32Q8TC27 787 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 OSCP1Q8WVF1 389 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 NTPCRQ9BSD7 190 aaKnown RBP8.36□□□□□ -1.07
SMC3-202ENST00000462899 BHMT2Q9H2M3 363 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 SLC32A1Q9H598 525 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 PLEKHA5Q9HAU0 1116 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 CAPN10Q9HC96 672 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 MBD1Q9UIS9 605 aaPredicted RBP8.36□□□□□ -1.07
SMC3-202ENST00000462899 PILRBQ9UKJ0 227 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 MMP17Q9ULZ9 603 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 FCF1Q9Y324 198 aaKnown RBP8.36□□□□□ -1.07
SMC3-202ENST00000462899 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.36□□□□□ -1.07
SMC3-202ENST00000462899 CYP46A1Q9Y6A2 500 aa8.36□□□□□ -1.07
SMC3-202ENST00000462899 TMEM131Q92545 1883 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms