RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 PDZD4Q76G19 769 aaPredicted RBP12.88□□□□□ -0.35
HPS1-206ENST00000462743 NPAS3Q8IXF0 933 aa12.88□□□□□ -0.35
HPS1-206ENST00000462743 UBALD2Q8IYN6 164 aa12.88□□□□□ -0.35
HPS1-206ENST00000462743 LMO3Q8TAP4 145 aa12.88□□□□□ -0.35
HPS1-206ENST00000462743 C8orf48Q96LL4 319 aa12.88□□□□□ -0.35
HPS1-206ENST00000462743 MYRFLQ96LU7 910 aa12.88□□□□□ -0.35
HPS1-206ENST00000462743 SEPT5Q99719 369 aaPredicted RBP12.88□□□□□ -0.35
HPS1-206ENST00000462743 KCNK12Q9HB15 430 aa12.88□□□□□ -0.35
HPS1-206ENST00000462743 IL21Q9HBE4 155 aa12.88□□□□□ -0.35
HPS1-206ENST00000462743 MUTYHQ9UIF7 546 aa12.88□□□□□ -0.35
HPS1-206ENST00000462743 ZMYM5Q9UJ78 669 aa12.88□□□□□ -0.35
HPS1-206ENST00000462743 MYH10P35580 1976 aa12.88□□□□□ -0.35
HPS1-206ENST00000462743 ZNF638Q14966 1978 aaKnown RBP12.88□□□□□ -0.35
HPS1-206ENST00000462743 F5P12259 2224 aa12.88□□□□□ -0.35
HPS1-206ENST00000462743 ZDBF2Q9HCK1 2354 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 GPR37L1O60883 481 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 CILPO75339 1184 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 SOAT2O75908 522 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 NOL4O94818 638 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 F11P03951 625 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 SP100P23497 879 aaPredicted RBP12.87□□□□□ -0.35
HPS1-206ENST00000462743 RAP1GAPP47736 663 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 NDST1P52848 882 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 PSMC1P62191 440 aaKnown RBP12.87□□□□□ -0.35
HPS1-206ENST00000462743 HTR4Q13639 388 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 VEPH1Q14D04 833 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 CCDC183Q5T5S1 534 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 PAQR9Q6ZVX9 377 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 GAREM2Q75VX8 874 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 GET4Q7L5D6 327 aaPredicted RBP12.87□□□□□ -0.35
HPS1-206ENST00000462743 EHBP1Q8NDI1 1231 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 SHKBP1Q8TBC3 707 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 ENOX1Q8TC92 643 aaKnown RBP12.87□□□□□ -0.35
HPS1-206ENST00000462743 WHAMMQ8TF30 809 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 TATDN2Q93075 761 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 MYLPFQ96A32 169 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 ELMO3Q96BJ8 720 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 TCEAL4Q96EI5 215 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 TRMT2BQ96GJ1 504 aaKnown RBP12.87□□□□□ -0.35
HPS1-206ENST00000462743 C1QTNF1Q9BXJ1 281 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 B3GNT5Q9BYG0 378 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 THAP9Q9H5L6 903 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 MMRN2Q9H8L6 949 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 TRPV4Q9HBA0 871 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.87□□□□□ -0.35
HPS1-206ENST00000462743 VCANP13611 3396 aa12.87□□□□□ -0.35
HPS1-206ENST00000462743 ANAPC1Q9H1A4 1944 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 AFPP02771 609 aaKnown RBP12.86□□□□□ -0.35
HPS1-206ENST00000462743 MYL4P12829 197 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 BDNFP23560 247 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 CDC25CP30307 473 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 CETN1Q12798 172 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 TDGQ13569 410 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 DDR2Q16832 855 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 CCDC142Q17RM4 750 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 MDH1BQ5I0G3 518 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 MTSS1LQ765P7 747 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 BMP8AQ7Z5Y6 402 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 SLC44A3Q8N4M1 653 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 GIPC2Q8TF65 315 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 HNRNPABQ99729 332 aaKnown RBP12.86□□□□□ -0.35
HPS1-206ENST00000462743 LPIN3Q9BQK8 851 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 TTLL2Q9BWV7 592 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 NT5C1AQ9BXI3 368 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 ELOVL4Q9GZR5 314 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 DNAI2Q9GZS0 605 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 DPEP3Q9H4B8 488 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 ZNF334Q9HCZ1 680 aaPredicted RBP12.86□□□□□ -0.35
HPS1-206ENST00000462743 IL37Q9NZH6 218 aa12.86□□□□□ -0.35
HPS1-206ENST00000462743 UXTQ9UBK9 157 aaPredicted RBP12.86□□□□□ -0.35
HPS1-206ENST00000462743 C5orf42Q9H799 3197 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 GTPBP10A4D1E9 387 aaKnown RBP12.85□□□□□ -0.35
HPS1-206ENST00000462743 SLC38A8A6NNN8 435 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 NRG2O14511 850 aaPredicted RBP12.85□□□□□ -0.35
HPS1-206ENST00000462743 TRIM66O15016 1216 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 ECI2O75521 394 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 ASGR2P07307 311 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 CEBPBP17676 345 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 TRIM21P19474 475 aaKnown RBP12.85□□□□□ -0.35
HPS1-206ENST00000462743 TBXAS1P24557 533 aaPredicted RBP12.85□□□□□ -0.35
HPS1-206ENST00000462743 CYP27A1Q02318 531 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 SIGLEC14Q08ET2 396 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 MTMR3Q13615 1198 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 CUL2Q13617 745 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 PARM1Q6UWI2 310 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 SCARA5Q6ZMJ2 495 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 TRIM67Q6ZTA4 783 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 TMEM150AQ86TG1 271 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 ACOT1Q86TX2 421 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 FAM114A1Q8IWE2 563 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 FUKQ8N0W3 1084 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 UBR7Q8N806 425 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 FAM200AQ8TCP9 573 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 E2F7Q96AV8 911 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 MCRS1Q96EZ8 462 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 CNOT6LQ96LI5 555 aaKnown RBP12.85□□□□□ -0.35
HPS1-206ENST00000462743 TWNKQ96RR1 684 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 TASP1Q9H6P5 420 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 CSNK1G1Q9HCP0 422 aa12.85□□□□□ -0.35
HPS1-206ENST00000462743 CISHQ9NSE2 258 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms