RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 DRD1P21728 446 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 IFNAR2P48551 515 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 PDE6CP51160 858 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 CASP5P51878 434 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 AMPD3Q01432 767 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 FAM160A1Q05DH4 1040 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 NR1H3Q13133 447 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 STK38Q15208 465 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 MAPRE1Q15691 268 aaKnown RBP16.5■□□□□ 0.23
SKA3-204ENST00000462482 CFAP221Q4G0U5 840 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 FBXO43Q4G163 708 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 TMEM196Q5HYL7 178 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 TRIM68Q6AZZ1 485 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 FAM173BQ6P4H8 233 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 PRR23CQ6ZRP0 262 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 TMEM150AQ86TG1 271 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 PDILTQ8N807 584 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 CCDC26Q8TAB7 109 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 P2RY13Q9BPV8 354 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 KIAA1586Q9HCI6 787 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 HPS4Q9NQG7 708 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 EHD2Q9NZN4 543 aa16.5■□□□□ 0.23
SKA3-204ENST00000462482 MORC2Q9Y6X9 1032 aaPredicted RBP16.5■□□□□ 0.23
SKA3-204ENST00000462482 F5P12259 2224 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 CCDC163A0A0D9SF12 145 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 FRMD3A2A2Y4 597 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 SLC30A4O14863 429 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 RPP40O75818 363 aaKnown RBP16.49■□□□□ 0.23
SKA3-204ENST00000462482 KCNB1Q14721 858 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 MTF1Q14872 753 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 DUOXA2Q1HG44 320 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 WDR44Q5JSH3 913 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 CACNA2D4Q7Z3S7 1137 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 CAMKK1Q8N5S9 505 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 FAM160A2Q8N612 972 aaPredicted RBP16.49■□□□□ 0.23
SKA3-204ENST00000462482 C12orf50Q8NA57 414 aaPredicted RBP16.49■□□□□ 0.23
SKA3-204ENST00000462482 ZSWIM2Q8NEG5 633 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 ATP2A3Q93084 1043 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 INTS4Q96HW7 963 aaKnown RBP16.49■□□□□ 0.23
SKA3-204ENST00000462482 HPDLQ96IR7 371 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 MYRFLQ96LU7 910 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 USP28Q96RU2 1077 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 TNMDQ9H2S6 317 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 INTS13Q9NVM9 706 aa16.49■□□□□ 0.23
SKA3-204ENST00000462482 DUS2Q9NX74 493 aaKnown RBP16.49■□□□□ 0.23
SKA3-204ENST00000462482 MAGEC2Q9UBF1 373 aaPredicted RBP16.49■□□□□ 0.23
SKA3-204ENST00000462482 RNF40O75150 1001 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 ARSAP15289 507 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 ANXA13P27216 316 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 MAGEA11P43364 429 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 WNT7BP56706 349 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 AASDHQ4L235 1098 aaPredicted RBP16.48■□□□□ 0.23
SKA3-204ENST00000462482 IL31Q6EBC2 164 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 FSTL4Q6MZW2 842 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 VSTM1Q6UX27 236 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 STKLD1Q8NE28 680 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 OSCP1Q8WVF1 389 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 GAB3Q8WWW8 586 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 DDX1Q92499 740 aaKnown RBP16.48■□□□□ 0.23
SKA3-204ENST00000462482 LOXL4Q96JB6 756 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 FNBP1Q96RU3 617 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 MMS19Q96T76 1030 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 SYT15Q9BQS2 421 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 CUEDC2Q9H467 287 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 CDH9Q9ULB4 789 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 FANCMQ8IYD8 2048 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 PDCD11Q14690 1871 aaKnown RBP16.48■□□□□ 0.23
SKA3-204ENST00000462482 WDR87Q6ZQQ6 2873 aa16.48■□□□□ 0.23
SKA3-204ENST00000462482 MYH11P35749 1972 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 GABRDO14764 452 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 AXIN1O15169 862 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 AKAP3O75969 853 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 EGFP01133 1207 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 GRIK1P39086 918 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 PXNP49023 591 aaPredicted RBP16.47■□□□□ 0.23
SKA3-204ENST00000462482 GALK1P51570 392 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 PSMD2Q13200 908 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 SOWAHAQ2M3V2 549 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 LMBRD2Q68DH5 695 aaPredicted RBP16.47■□□□□ 0.23
SKA3-204ENST00000462482 OSTM1Q86WC4 334 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 WDR49Q8IV35 697 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 CD101Q93033 1021 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 ACDQ96AP0 544 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 CEP295NLQ96MC4 621 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 ZNF396Q96N95 335 aaPredicted RBP16.47■□□□□ 0.23
SKA3-204ENST00000462482 SNX25Q9H3E2 840 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 ECT2Q9H8V3 914 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 C2orf42Q9NWW7 574 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 TRPM5Q9NZQ8 1165 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 SIX4Q9UIU6 781 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 COL4A2P08572 1712 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 TICRRQ7Z2Z1 1910 aa16.47■□□□□ 0.23
SKA3-204ENST00000462482 STX6O43752 255 aa16.46■□□□□ 0.23
SKA3-204ENST00000462482 NFATC1O95644 943 aa16.46■□□□□ 0.23
SKA3-204ENST00000462482 HDCP19113 662 aa16.46■□□□□ 0.23
SKA3-204ENST00000462482 KCNA4P22459 653 aa16.46■□□□□ 0.23
SKA3-204ENST00000462482 GJA4P35212 333 aa16.46■□□□□ 0.23
SKA3-204ENST00000462482 ASIC1P78348 528 aa16.46■□□□□ 0.23
SKA3-204ENST00000462482 CYP27A1Q02318 531 aa16.46■□□□□ 0.23
SKA3-204ENST00000462482 PPM1JQ5JR12 505 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms