RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 SLC5A9Q2M3M2 681 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 SOWAHAQ2M3V2 549 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 SLC44A4Q53GD3 710 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 FAM78AQ5JUQ0 283 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 PRSS36Q5K4E3 855 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 KRT39Q6A163 491 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 KLHL10Q6JEL2 608 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 PHLDB3Q6NSJ2 640 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 TPRG1Q6ZUI0 275 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 DENND5BQ6ZUT9 1274 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 TADA2BQ86TJ2 420 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 FMR1NBQ8N0W7 255 aaPredicted RBP9.54□□□□□ -0.88
DDX39B-216ENST00000462421 CELF5Q8N6W0 485 aaKnown RBP9.54□□□□□ -0.88
DDX39B-216ENST00000462421 B3GALNT2Q8NCR0 500 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 PDZD8Q8NEN9 1154 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 SHKBP1Q8TBC3 707 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 MYCBPAPQ8TBZ2 947 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 ASIC4Q96FT7 647 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 SMARCD1Q96GM5 515 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 DHTKD1Q96HY7 919 aaPredicted RBP9.54□□□□□ -0.88
DDX39B-216ENST00000462421 ASB16Q96NS5 453 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 KCTD10Q9H3F6 313 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 TMEM8AQ9HCN3 771 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 C11orf16Q9NQ32 467 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 OBP2AQ9NY56 170 aa9.54□□□□□ -0.88
DDX39B-216ENST00000462421 ARMCX3Q9UH62 379 aaPredicted RBP9.54□□□□□ -0.88
DDX39B-216ENST00000462421 KANSL1LA0AUZ9 987 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 SLC38A8A6NNN8 435 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 SOBPA7XYQ1 873 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 HEPACAM2A8MVW5 462 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 LAMTOR5O43504 91 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 GALR2O43603 387 aaPredicted RBP9.53□□□□□ -0.88
DDX39B-216ENST00000462421 TPM2P07951 284 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 CCDC192P0DO97 292 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 GJA1P17302 382 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 PTPN1P18031 435 aaKnown RBP9.53□□□□□ -0.88
DDX39B-216ENST00000462421 BDNFP23560 247 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 CYP2F1P24903 491 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 HOXD13P35453 343 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 GCLMP48507 274 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 IFNAR2P48551 515 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 DDR2Q16832 855 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 UNC93AQ86WB7 457 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 DDX42Q86XP3 938 aaKnown RBP eCLIP9.53□□□□□ -0.88
DDX39B-216ENST00000462421 MFSD6LQ8IWD5 586 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 ELOA2Q8IYF1 753 aaPredicted RBP9.53□□□□□ -0.88
DDX39B-216ENST00000462421 MAB21L3Q8N8X9 362 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 CCDC26Q8TAB7 109 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 BPIFB1Q8TDL5 484 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 TMEM174Q8WUU8 243 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 TCEAL4Q96EI5 215 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 CHAMP1Q96JM3 812 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 C8orf33Q9H7E9 229 aaPredicted RBP9.53□□□□□ -0.88
DDX39B-216ENST00000462421 CYP3A43Q9HB55 503 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 DMAP1Q9NPF5 467 aaPredicted RBP9.53□□□□□ -0.88
DDX39B-216ENST00000462421 SPATA6Q9NWH7 488 aaPredicted RBP9.53□□□□□ -0.88
DDX39B-216ENST00000462421 BDP1A6H8Y1 2624 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 PLXNA3P51805 1871 aa9.53□□□□□ -0.88
DDX39B-216ENST00000462421 REV3LO60673 3130 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 GABRDO14764 452 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 CHADO15335 359 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 HLA-DRAP01903 254 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 FAM200BP0CF97 657 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 GLULP15104 373 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 ATF6P18850 670 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 CD58P19256 250 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 CDR1P51861 262 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 VCPP55072 806 aaKnown RBP9.52□□□□□ -0.89
DDX39B-216ENST00000462421 WNT7BP56706 349 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 NLRP12P59046 1061 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 NOP14P78316 857 aaKnown RBP9.52□□□□□ -0.89
DDX39B-216ENST00000462421 CYP4F8P98187 520 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 PAK1Q13153 545 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 ZACNQ401N2 412 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 TANGO2Q6ICL3 276 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 SV2AQ7L0J3 742 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 ARID3BQ8IVW6 561 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-216ENST00000462421 SMYD4Q8IYR2 804 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-216ENST00000462421 CMTM8Q8IZV2 173 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 TMEM130Q8N3G9 435 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 CPA6Q8N4T0 437 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 TRIML1Q8N9V2 468 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 FBXL13Q8NEE6 735 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 ST13P5Q8NFI4 369 aaPredicted RBP9.52□□□□□ -0.89
DDX39B-216ENST00000462421 FAM3CQ92520 227 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 SECISBP2LQ93073 1101 aaKnown RBP9.52□□□□□ -0.89
DDX39B-216ENST00000462421 FBXO32Q969P5 355 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 TRMT2BQ96GJ1 504 aaKnown RBP9.52□□□□□ -0.89
DDX39B-216ENST00000462421 BORCS6Q96GS4 357 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 SPATA17Q96L03 361 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 CEP63Q96MT8 703 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 HINFPQ9BQA5 517 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 MRPL45Q9BRJ2 306 aaKnown RBP9.52□□□□□ -0.89
DDX39B-216ENST00000462421 IER2Q9BTL4 223 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 NT5C1AQ9BXI3 368 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 NIF3L1Q9GZT8 377 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 SMOC2Q9H3U7 446 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 FBXO44Q9H4M3 255 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 SMYD3Q9H7B4 428 aa9.52□□□□□ -0.89
DDX39B-216ENST00000462421 VRTNQ9H8Y1 702 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms