RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 TMC7Q7Z402 723 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 UNC93AQ86WB7 457 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 ZNF280BQ86YH2 543 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 VN1R2Q8NFZ6 395 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 OR6B3Q8NGW1 331 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 TMEM176AQ96HP8 235 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 NT5C1AQ9BXI3 368 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 SDCBP2Q9H190 292 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 EPHX3Q9H6B9 360 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 NAGPAQ9UK23 515 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 CEP83Q9Y592 693 aa16.14■□□□□ 0.17
TMEM39A-203ENST00000461654 NT5C1B-RDH14C9J2C7 533 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 DDX3XO00571 662 aaKnown RBP eCLIP16.13■□□□□ 0.172e-10■■■■□ 21.8
TMEM39A-203ENST00000461654 SPTLC1O15269 473 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 DDHD2O94830 711 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 MMEP08473 750 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 SRGAP2BP0DMP2 458 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 NDST1P52848 882 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 PTPN14Q15678 1187 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 CLUL1Q15846 466 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 PLPP4Q5VZY2 271 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 TMEM173Q86WV6 379 aaPredicted RBP16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 METTL23Q86XA0 190 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 ADGRF2Q8IZF7 708 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 TMEM86AQ8N2M4 240 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 SLC30A5Q8TAD4 765 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 KHSRPQ92945 711 aaKnown RBP eCLIP16.13■□□□□ 0.172e-7■■□□□ 13.8
TMEM39A-203ENST00000461654 SENP8Q96LD8 212 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 HEXIM2Q96MH2 286 aaKnown RBP16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 SYT11Q9BT88 431 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 LZTFL1Q9NQ48 299 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 DNAJB4Q9UDY4 337 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 DSEQ9UL01 958 aa16.13■□□□□ 0.17
TMEM39A-203ENST00000461654 USP27XA6NNY8 438 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 A8MXQ7 604 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 KIF2AO00139 706 aaPredicted RBP16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 TRAPPC3O43617 180 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 CXCL14O95715 111 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 TUBB4AP04350 444 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 H2AFZP0C0S5 128 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 CTSAP10619 480 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 VDRP11473 427 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 ODC1P11926 461 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 GZMAP12544 262 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 HOXB8P17481 243 aaPredicted RBP16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 SSTR3P32745 418 aaPredicted RBP16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 GNL1P36915 607 aaPredicted RBP16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 OR1G1P47890 313 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 SLC11A1P49279 550 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 RAD23BP54727 409 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 DSC1Q08554 894 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 SOWAHAQ2M3V2 549 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 ZNF662Q6ZS27 426 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 H2AFVQ71UI9 128 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 REXO1L1PQ8IX06 675 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 VPS52Q8N1B4 723 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 LNX1Q8TBB1 728 aaPredicted RBP16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 ZNF606Q8WXB4 792 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 MRPL45Q9BRJ2 306 aaKnown RBP16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 COLEC11Q9BWP8 271 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 ZBP1Q9H171 429 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 S1PR5Q9H228 398 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 ACP6Q9NPH0 428 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 INTUQ9ULD6 942 aa16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 REXO2Q9Y3B8 237 aaKnown RBP16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 PDCD11Q14690 1871 aaKnown RBP16.12■□□□□ 0.17
TMEM39A-203ENST00000461654 TMCO5BA8MYB1 307 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 ZNF263O14978 683 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 KIF5CO60282 957 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 B4GALT3O60512 393 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 RTN2O75298 545 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 ALADP13716 330 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 CHRNB2P17787 502 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 WARSP23381 471 aaKnown RBP16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 LHX1P48742 406 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 FMO1Q01740 532 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 STILQ15468 1287 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 SGO2Q562F6 1265 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 ANKRD54Q6NXT1 300 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 COLGALT2Q8IYK4 626 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 SLC4A11Q8NBS3 891 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 SPATA18Q8TC71 538 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 BCL7CQ8WUZ0 217 aaPredicted RBP16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 DDX1Q92499 740 aaKnown RBP16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 SUSD6Q92537 303 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 RABGGTAQ92696 567 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 TNIP3Q96KP6 325 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 ELOVL4Q9GZR5 314 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 L1RE1Q9UN81 338 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 FAN1Q9Y2M0 1017 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 ATP8B3O60423 1300 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 BDP1A6H8Y1 2624 aa16.11■□□□□ 0.17
TMEM39A-203ENST00000461654 TMEM189-UBE2V1I3L0A0 370 aa16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 NRP1O14786 923 aa16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 PJA2O43164 708 aa16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 GPR37L1O60883 481 aa16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 CLASP2O75122 1294 aaKnown RBP16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 TADA2AO75478 443 aa16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 LSM8O95777 96 aaKnown RBP16.1■□□□□ 0.17
TMEM39A-203ENST00000461654 EFEMP2O95967 443 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms