RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 NIF3L1Q9GZT8 377 aa5.6□□□□□ -1.51
BRCA1-206ENST00000461574 UNC45AQ9H3U1 944 aa5.6□□□□□ -1.51
BRCA1-206ENST00000461574 RXFP1Q9HBX9 757 aa5.6□□□□□ -1.51
BRCA1-206ENST00000461574 PARD6AQ9NPB6 346 aa5.6□□□□□ -1.51
BRCA1-206ENST00000461574 NDRG2Q9UN36 371 aaKnown RBP5.6□□□□□ -1.51
BRCA1-206ENST00000461574 COL4A3BPQ9Y5P4 624 aa5.6□□□□□ -1.51
BRCA1-206ENST00000461574 ASPMQ8IZT6 3477 aa5.6□□□□□ -1.51
BRCA1-206ENST00000461574 ITPR1Q14643 2758 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 GREB1Q4ZG55 1949 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 KLF18A0A0U1RQI7 1052 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 F8W810 466 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 MSH4O15457 936 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 FOXD2O60548 495 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 LRP3O75074 770 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 MAFO75444 373 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 TADA2AO75478 443 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 RETP07949 1114 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 NCLP19338 710 aaKnown RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 RPS9P46781 194 aaKnown RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 CCR3P51677 355 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 MTAPQ13126 283 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 SIM2Q14190 667 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 TARBP2Q15633 366 aaKnown RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 PSMD5Q16401 504 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 PABPC1LQ4VXU2 614 aaKnown RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 PLA2G4FQ68DD2 849 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 NOTUMQ6P988 496 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 SLC23A3Q6PIS1 610 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 PRSS55Q6UWB4 352 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 SRGAP1Q7Z6B7 1085 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 MRPL10Q7Z7H8 261 aaKnown RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 SGMS1Q86VZ5 419 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 EXOC8Q8IYI6 725 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 CELF5Q8N6W0 485 aaKnown RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 CCDC148Q8NFR7 591 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 RDM1Q8NG50 284 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 SLC7A14Q8TBB6 771 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 STK35Q8TDR2 534 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 EPS8L3Q8TE67 593 aaKnown RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 HASPINQ8TF76 798 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 CCDC136Q96JN2 1154 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 HEXIM2Q96MH2 286 aaKnown RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 RIT2Q99578 217 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 SLC38A3Q99624 504 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 DNAJC25Q9H1X3 360 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 SLKQ9H2G2 1235 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 TNKS2Q9H2K2 1166 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 BRD9Q9H8M2 597 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 PRMT8Q9NR22 394 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 HEBP1Q9NRV9 189 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 SEMA4GQ9NTN9 838 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 FNIP2Q9P278 1114 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 GPN3Q9UHW5 284 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 ADAM28Q9UKQ2 775 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 MRPS23Q9Y3D9 190 aaKnown RBP5.59□□□□□ -1.51
BRCA1-206ENST00000461574 IPPQ9Y573 584 aa5.59□□□□□ -1.51
BRCA1-206ENST00000461574 GCN1Q92616 2671 aaKnown RBP5.58□□□□□ -1.52
BRCA1-206ENST00000461574 CCDC196A0A1B0GTZ2 297 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 ESYT2A0FGR8 921 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 LRRC10BA6NIK2 292 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 INO80B-WBP1J3KQ70 363 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 MAN2B1O00754 1011 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 SLC27A2O14975 620 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 DKC1O60832 514 aaKnown RBP eCLIP5.58□□□□□ -1.52
BRCA1-206ENST00000461574 C1RP00736 705 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 IGHDP01880 384 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 HOXA9P31269 272 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 CIITAP33076 1130 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 GRIK3Q13003 919 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 HSP90AA2PQ14568 343 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-206ENST00000461574 ACAP1Q15027 740 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 CSRP2Q16527 193 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 PFKFB3Q16875 520 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-206ENST00000461574 FAM171A1Q5VUB5 890 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 CREB3L3Q68CJ9 461 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 PDXDC1Q6P996 788 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 DTHD1Q6ZMT9 781 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 CEP68Q76N32 757 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 FAM214BQ7L5A3 538 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 RNF168Q8IYW5 571 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-206ENST00000461574 RNF149Q8NC42 400 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 ITFG1Q8TB96 612 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 TCP11Q8WWU5 503 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 PRPF31Q8WWY3 499 aaKnown RBP5.58□□□□□ -1.52
BRCA1-206ENST00000461574 CRYGNQ8WXF5 182 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 RABGGTAQ92696 567 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 DNASE1L2Q92874 299 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 SLC5A5Q92911 643 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 GJA10Q969M2 543 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 TMEM143Q96AN5 459 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 CLDN23Q96B33 292 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 LENG9Q96B70 501 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 CCDC51Q96ER9 411 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 MCRS1Q96EZ8 462 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 CPB2Q96IY4 423 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 CEP170P1Q96L14 293 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 TCEANC2Q96MN5 208 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 CCDC43Q96MW1 224 aaKnown RBP5.58□□□□□ -1.52
BRCA1-206ENST00000461574 IER2Q9BTL4 223 aa5.58□□□□□ -1.52
BRCA1-206ENST00000461574 EIF2AQ9BY44 585 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms