RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 TCF15Q12870 199 aa5.39□□□□□ -1.55
CFHR3-204ENST00000461558 SNAPC2Q13487 334 aa5.39□□□□□ -1.55
CFHR3-204ENST00000461558 FAM50AQ14320 339 aaKnown RBP5.39□□□□□ -1.55
CFHR3-204ENST00000461558 ACAP2Q15057 778 aa5.39□□□□□ -1.55
CFHR3-204ENST00000461558 INAVAQ3KP66 663 aa5.39□□□□□ -1.55
CFHR3-204ENST00000461558 PGM2L1Q6PCE3 622 aa5.39□□□□□ -1.55
CFHR3-204ENST00000461558 SLC4A10Q6U841 1118 aa5.39□□□□□ -1.55
CFHR3-204ENST00000461558 CATSPERGQ6ZRH7 1159 aa5.39□□□□□ -1.55
CFHR3-204ENST00000461558 KRT73Q86Y46 540 aa5.39□□□□□ -1.55
CFHR3-204ENST00000461558 GALNT16Q8N428 558 aa5.39□□□□□ -1.55
CFHR3-204ENST00000461558 VRK1Q99986 396 aaPredicted RBP5.39□□□□□ -1.55
CFHR3-204ENST00000461558 DLL3Q9NYJ7 618 aa5.39□□□□□ -1.55
CFHR3-204ENST00000461558 NAIPQ13075 1403 aa5.39□□□□□ -1.55
CFHR3-204ENST00000461558 GRIN2AQ12879 1464 aa5.39□□□□□ -1.55
CFHR3-204ENST00000461558 KDM5BQ9UGL1 1544 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 PRSS29PA6NIE9 313 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 INSIG1O15503 277 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 VPS4BO75351 444 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 RPLP2P05387 115 aaKnown RBP5.38□□□□□ -1.55
CFHR3-204ENST00000461558 CYP2C18P33260 490 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 ARHGAP25P42331 645 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 ZNF260Q3ZCT1 412 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 KHDC1Q4VXA5 237 aaKnown RBP5.38□□□□□ -1.55
CFHR3-204ENST00000461558 RUSC1-AS1Q66K80 236 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 MAVSQ7Z434 540 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 WDR53Q7Z5U6 358 aaPredicted RBP5.38□□□□□ -1.55
CFHR3-204ENST00000461558 C1orf162Q8NEQ5 155 aaPredicted RBP5.38□□□□□ -1.55
CFHR3-204ENST00000461558 ATL2Q8NHH9 583 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 SIK2Q9H0K1 926 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 GNL3LQ9NVN8 582 aaKnown RBP5.38□□□□□ -1.55
CFHR3-204ENST00000461558 MKS1Q9NXB0 559 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 ZNF580Q9UK33 172 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 AGAP1Q9UPQ3 857 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 RAD54BQ9Y620 910 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 CFAP20Q9Y6A4 193 aaKnown RBP5.38□□□□□ -1.55
CFHR3-204ENST00000461558 AKNAQ7Z591 1439 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 UACAQ9BZF9 1416 aa5.38□□□□□ -1.55
CFHR3-204ENST00000461558 DNMT1P26358 1616 aaKnown RBP5.37□□□□□ -1.55
CFHR3-204ENST00000461558 CROCC2H7BZ55 1655 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 ADGBQ8N7X0 1667 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 CYP2D7A0A087X1C5 515 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 KIF20AO95235 890 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 HSD3B2P26439 372 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 TKTP29401 623 aaKnown RBP5.37□□□□□ -1.55
CFHR3-204ENST00000461558 IARSP41252 1262 aaKnown RBP5.37□□□□□ -1.55
CFHR3-204ENST00000461558 GCLCP48506 637 aaPredicted RBP5.37□□□□□ -1.55
CFHR3-204ENST00000461558 PLCD1P51178 756 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 KIF23Q02241 960 aaPredicted RBP5.37□□□□□ -1.55
CFHR3-204ENST00000461558 RAPGEF1Q13905 1077 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 PCID2Q5JVF3 399 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 PPP1R32Q7Z5V6 425 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 DTX2Q86UW9 622 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 CNGA4Q8IV77 575 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 CBARPQ8N350 705 aaPredicted RBP5.37□□□□□ -1.55
CFHR3-204ENST00000461558 CNTD1Q8N815 330 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 PNLDC1Q8NA58 520 aaKnown RBP5.37□□□□□ -1.55
CFHR3-204ENST00000461558 CAMKK2Q96RR4 588 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 TMEM79Q9BSE2 394 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 TINAGL1Q9GZM7 467 aaPredicted RBP5.37□□□□□ -1.55
CFHR3-204ENST00000461558 MIA2Q96PC5 1412 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 DENND4BO75064 1496 aaPredicted RBP5.37□□□□□ -1.55
CFHR3-204ENST00000461558 MAGI1Q96QZ7 1491 aaPredicted RBP5.37□□□□□ -1.55
CFHR3-204ENST00000461558 ITSN2Q9NZM3 1697 aa5.37□□□□□ -1.55
CFHR3-204ENST00000461558 RARBP10826 455 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 LIPAP38571 399 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 CLCN2P51788 898 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 CYP4F2P78329 520 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 DAZAP2Q15038 168 aaPredicted RBP5.36□□□□□ -1.55
CFHR3-204ENST00000461558 RABEP1Q15276 862 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 PXDC1Q5TGL8 231 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 TTC7BQ86TV6 843 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 CHSY1Q86X52 802 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 SAMD14Q8IZD0 417 aaPredicted RBP5.36□□□□□ -1.55
CFHR3-204ENST00000461558 C8orf58Q8NAV2 365 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 COA7Q96BR5 231 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 C5orf34Q96MH7 638 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 ASB2Q96Q27 587 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 NELL2Q99435 816 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 SLAMF7Q9NQ25 335 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 PDGFCQ9NRA1 345 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 USP35Q9P2H5 1018 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 SH2B3Q9UQQ2 575 aa5.36□□□□□ -1.55
CFHR3-204ENST00000461558 NUP153P49790 1475 aaKnown RBP5.36□□□□□ -1.55
CFHR3-204ENST00000461558 SYNJ2O15056 1496 aa5.35□□□□□ -1.55
CFHR3-204ENST00000461558 H3BNC9 293 aa5.35□□□□□ -1.55
CFHR3-204ENST00000461558 SLC16A3O15427 465 aaKnown RBP5.35□□□□□ -1.55
CFHR3-204ENST00000461558 TLR5O60602 858 aa5.35□□□□□ -1.55
CFHR3-204ENST00000461558 IL6RP08887 468 aaPredicted RBP5.35□□□□□ -1.55
CFHR3-204ENST00000461558 SNHG28P0DPA3 235 aa5.35□□□□□ -1.55
CFHR3-204ENST00000461558 SMARCA1P28370 1054 aa5.35□□□□□ -1.55
CFHR3-204ENST00000461558 PIK3CGP48736 1102 aa5.35□□□□□ -1.55
CFHR3-204ENST00000461558 HOXA4Q00056 320 aaPredicted RBP5.35□□□□□ -1.55
CFHR3-204ENST00000461558 KIF22Q14807 665 aa5.35□□□□□ -1.55
CFHR3-204ENST00000461558 TREML2Q5T2D2 321 aa5.35□□□□□ -1.55
CFHR3-204ENST00000461558 NAPRTQ6XQN6 538 aa5.35□□□□□ -1.55
CFHR3-204ENST00000461558 SIN3AQ96ST3 1273 aa5.35□□□□□ -1.55
CFHR3-204ENST00000461558 MACROD1Q9BQ69 325 aa5.35□□□□□ -1.55
CFHR3-204ENST00000461558 FAM126AQ9BYI3 521 aaPredicted RBP5.35□□□□□ -1.55
CFHR3-204ENST00000461558 PUS7LQ9H0K6 701 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms