RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 SCARA3Q6AZY7 606 aa14.94□□□□□ -0.02
USP4-206ENST00000461553 STKLD1Q8NE28 680 aa14.94□□□□□ -0.02
USP4-206ENST00000461553 BPIFB1Q8TDL5 484 aa14.94□□□□□ -0.02
USP4-206ENST00000461553 MRPS31Q92665 395 aaKnown RBP14.94□□□□□ -0.02
USP4-206ENST00000461553 MYLPFQ96A32 169 aa14.94□□□□□ -0.02
USP4-206ENST00000461553 PAGE5Q96GU1 130 aa14.94□□□□□ -0.02
USP4-206ENST00000461553 PKMYT1Q99640 499 aa14.94□□□□□ -0.02
USP4-206ENST00000461553 IER2Q9BTL4 223 aa14.94□□□□□ -0.02
USP4-206ENST00000461553 KIF9Q9HAQ2 790 aa14.94□□□□□ -0.02
USP4-206ENST00000461553 GTF3C4Q9UKN8 822 aa14.94□□□□□ -0.02
USP4-206ENST00000461553 CDH9Q9ULB4 789 aa14.94□□□□□ -0.02
USP4-206ENST00000461553 ZNF292O60281 2723 aa14.94□□□□□ -0.02
USP4-206ENST00000461553 SLC38A8A6NNN8 435 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 KLRC4O43908 158 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 NOL4O94818 638 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 LMNAP02545 664 aaKnown RBP14.93□□□□□ -0.02
USP4-206ENST00000461553 HMGA1P17096 107 aaKnown RBP14.93□□□□□ -0.02
USP4-206ENST00000461553 WARSP23381 471 aaKnown RBP14.93□□□□□ -0.02
USP4-206ENST00000461553 TRPC3Q13507 836 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 DDR2Q16832 855 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 CCDC142Q17RM4 750 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 ZNF528Q3MIS6 628 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 KMT5BQ4FZB7 885 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 SDHAF4Q5VUM1 108 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 GPIHBP1Q8IV16 184 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 SCN4BQ8IWT1 228 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 CMTM8Q8IZV2 173 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 CELF5Q8N6W0 485 aaKnown RBP14.93□□□□□ -0.02
USP4-206ENST00000461553 MAB21L3Q8N8X9 362 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 KIAA0895Q8NCT3 520 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 KBTBD7Q8WVZ9 684 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 CCDC47Q96A33 483 aaKnown RBP14.93□□□□□ -0.02
USP4-206ENST00000461553 TRMT2BQ96GJ1 504 aaKnown RBP14.93□□□□□ -0.02
USP4-206ENST00000461553 CHRDQ9H2X0 955 aa14.93□□□□□ -0.02
USP4-206ENST00000461553 C8orf33Q9H7E9 229 aaPredicted RBP14.93□□□□□ -0.02
USP4-206ENST00000461553 KIAA1549LQ6ZVL6 1849 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 FRYLO94915 3013 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 SHISA7A6NL88 538 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 KINO60870 393 aaKnown RBP14.92□□□□□ -0.02
USP4-206ENST00000461553 CCNE1P24864 410 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 ANXA13P27216 316 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 MAGEA11P43364 429 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 SYKP43405 635 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 MLLT6P55198 1093 aaPredicted RBP14.92□□□□□ -0.02
USP4-206ENST00000461553 PSMD2Q13200 908 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 BIRC3Q13489 604 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 LRRC32Q14392 662 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 PPP2R5DQ14738 602 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 MAML2Q8IZL2 1156 aaPredicted RBP14.92□□□□□ -0.02
USP4-206ENST00000461553 ADSSL1Q8N142 457 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 SYAP1Q96A49 352 aaPredicted RBP14.92□□□□□ -0.02
USP4-206ENST00000461553 ZFYVE19Q96K21 471 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 SCAND2PQ9GZW5 306 aaPredicted RBP14.92□□□□□ -0.02
USP4-206ENST00000461553 SMG9Q9H0W8 520 aaKnown RBP14.92□□□□□ -0.02
USP4-206ENST00000461553 SNX25Q9H3E2 840 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 PRMT8Q9NR22 394 aaPredicted RBP14.92□□□□□ -0.02
USP4-206ENST00000461553 THG1LQ9NWX6 298 aaKnown RBP14.92□□□□□ -0.02
USP4-206ENST00000461553 MAGEC2Q9UBF1 373 aaPredicted RBP14.92□□□□□ -0.02
USP4-206ENST00000461553 HPSEQ9Y251 543 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 ATG2BQ96BY7 2078 aa14.92□□□□□ -0.02
USP4-206ENST00000461553 MYBPHLA2RUH7 354 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 SOBPA7XYQ1 873 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 SPECC1L-ADORA2AF8WAN1 911 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 PHACTR2O75167 634 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 TADA3O75528 432 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 F11P03951 625 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 CTHP32929 405 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 SOX9P48436 509 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 CYP27A1Q02318 531 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 CSTF1Q05048 431 aaKnown RBP14.91□□□□□ -0.02
USP4-206ENST00000461553 STK4Q13043 487 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 MTAPQ13126 283 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 WDR72Q3MJ13 1102 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 FAM171BQ6P995 826 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 VSTM1Q6UX27 236 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 LIMS2Q7Z4I7 341 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 TMEM150AQ86TG1 271 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 RALGPS2Q86X27 583 aaPredicted RBP14.91□□□□□ -0.02
USP4-206ENST00000461553 OR6B3Q8NGW1 331 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 HINFPQ9BQA5 517 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 SLC46A2Q9BY10 475 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 TRPC7Q9HCX4 862 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 CRTAC1Q9NQ79 661 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 GTSE1Q9NYZ3 720 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 ZDHHC9Q9Y397 364 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 PCDHGA2Q9Y5H1 932 aa14.91□□□□□ -0.02
USP4-206ENST00000461553 SPAG17Q6Q759 2223 aa14.9□□□□□ -0.02
USP4-206ENST00000461553 TRIM66O15016 1216 aa14.9□□□□□ -0.02
USP4-206ENST00000461553 ATP2C2O75185 946 aa14.9□□□□□ -0.02
USP4-206ENST00000461553 TACC1O75410 805 aa14.9□□□□□ -0.02
USP4-206ENST00000461553 KIF20AO95235 890 aa14.9□□□□□ -0.02
USP4-206ENST00000461553 STAU1O95793 577 aaKnown RBP14.9□□□□□ -0.02
USP4-206ENST00000461553 PDGFRBP09619 1106 aa14.9□□□□□ -0.02
USP4-206ENST00000461553 LMO2P25791 158 aa14.9□□□□□ -0.02
USP4-206ENST00000461553 ATICP31939 592 aa14.9□□□□□ -0.02
USP4-206ENST00000461553 CASP4P49662 377 aa14.9□□□□□ -0.02
USP4-206ENST00000461553 CCR3P51677 355 aa14.9□□□□□ -0.02
USP4-206ENST00000461553 AP3M2P53677 418 aa14.9□□□□□ -0.02
USP4-206ENST00000461553 ZNF699Q32M78 642 aa14.9□□□□□ -0.02
USP4-206ENST00000461553 MDH1BQ5I0G3 518 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms