RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 RBP5P82980 135 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 MYL7Q01449 175 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 RUNX3Q13761 415 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 DDR2Q16832 855 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 CCDC142Q17RM4 750 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 TRIM68Q6AZZ1 485 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 MON1AQ86VX9 555 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 GPD1LQ8N335 351 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 SPATA18Q8TC71 538 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 NOC3LQ8WTT2 800 aaKnown RBP15.79■□□□□ 0.12
SMPD4-216ENST00000461187 MRPS31Q92665 395 aaKnown RBP15.79■□□□□ 0.12
SMPD4-216ENST00000461187 MTMR12Q9C0I1 747 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 EBF3Q9H4W6 596 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 TMEM206Q9H813 350 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 KIF9Q9HAQ2 790 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 GTF3C4Q9UKN8 822 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 CDV3Q9UKY7 258 aaKnown RBP15.79■□□□□ 0.12
SMPD4-216ENST00000461187 SNX9Q9Y5X1 595 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 LAMA1P25391 3075 aa15.79■□□□□ 0.12
SMPD4-216ENST00000461187 ACACBO00763 2458 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 PTPRJQ12913 1337 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 GABRDO14764 452 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 HCRTO43612 131 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 LRP3O75074 770 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 NOL4O94818 638 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 KRT19P08727 400 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 RPL10AP62906 217 aaKnown RBP15.78■□□□□ 0.12
SMPD4-216ENST00000461187 ZNF268Q14587 947 aaPredicted RBP15.78■□□□□ 0.12
SMPD4-216ENST00000461187 SOWAHAQ2M3V2 549 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 TMEM196Q5HYL7 178 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 LMBRD2Q68DH5 695 aaPredicted RBP15.78■□□□□ 0.12
SMPD4-216ENST00000461187 FSTL4Q6MZW2 842 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 PKN3Q6P5Z2 889 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 CCDC65Q8IXS2 484 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 ADGRF2Q8IZF7 708 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 TOP6BLQ8N6T0 577 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 PDILTQ8N807 584 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 GLIS3Q8NEA6 775 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 TRMT2BQ96GJ1 504 aaKnown RBP15.78■□□□□ 0.12
SMPD4-216ENST00000461187 INTS4Q96HW7 963 aaKnown RBP15.78■□□□□ 0.12
SMPD4-216ENST00000461187 MYRFLQ96LU7 910 aa15.78■□□□□ 0.12
SMPD4-216ENST00000461187 UXTQ9UBK9 157 aaPredicted RBP15.78■□□□□ 0.12
SMPD4-216ENST00000461187 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.78■□□□□ 0.12
SMPD4-216ENST00000461187 TRDMT1O14717 391 aaKnown RBP15.77■□□□□ 0.12
SMPD4-216ENST00000461187 KIAA0391O15091 583 aaKnown RBP15.77■□□□□ 0.12
SMPD4-216ENST00000461187 TMEM191BP0C7N4 346 aa15.77■□□□□ 0.12
SMPD4-216ENST00000461187 ARSAP15289 507 aa15.77■□□□□ 0.12
SMPD4-216ENST00000461187 HOXD13P35453 343 aa15.77■□□□□ 0.12
SMPD4-216ENST00000461187 LHX1P48742 406 aa15.77■□□□□ 0.12
SMPD4-216ENST00000461187 NASPP49321 788 aaPredicted RBP15.77■□□□□ 0.12
SMPD4-216ENST00000461187 CFAP221Q4G0U5 840 aa15.77■□□□□ 0.12
SMPD4-216ENST00000461187 FAM171BQ6P995 826 aa15.77■□□□□ 0.12
SMPD4-216ENST00000461187 LIMS2Q7Z4I7 341 aa15.77■□□□□ 0.12
SMPD4-216ENST00000461187 WDR5BQ86VZ2 330 aa15.77■□□□□ 0.12
SMPD4-216ENST00000461187 OR5B17Q8NGF7 314 aa15.77■□□□□ 0.12
SMPD4-216ENST00000461187 HPS3Q969F9 1004 aa15.77■□□□□ 0.12
SMPD4-216ENST00000461187 ANKRD36BP1Q96IX9 119 aa15.77■□□□□ 0.12
SMPD4-216ENST00000461187 RTKNQ9BST9 563 aa15.77■□□□□ 0.12
SMPD4-216ENST00000461187 ZSCAN16Q9H4T2 348 aaPredicted RBP15.77■□□□□ 0.12
SMPD4-216ENST00000461187 INTS13Q9NVM9 706 aa15.77■□□□□ 0.12
SMPD4-216ENST00000461187 GON4LQ3T8J9 2241 aa15.76■□□□□ 0.11
SMPD4-216ENST00000461187 ATP2C2O75185 946 aa15.76■□□□□ 0.11
SMPD4-216ENST00000461187 PCSK1P29120 753 aa15.76■□□□□ 0.11
SMPD4-216ENST00000461187 GRSF1Q12849 480 aaKnown RBP eCLIP15.76■□□□□ 0.11
SMPD4-216ENST00000461187 E2F4Q16254 413 aa15.76■□□□□ 0.11
SMPD4-216ENST00000461187 DPH6Q7L8W6 267 aa15.76■□□□□ 0.11
SMPD4-216ENST00000461187 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.76■□□□□ 0.11
SMPD4-216ENST00000461187 CBWD2Q8IUF1 395 aa15.76■□□□□ 0.11
SMPD4-216ENST00000461187 SPATA2LQ8IUW3 424 aaPredicted RBP15.76■□□□□ 0.11
SMPD4-216ENST00000461187 FAM160A2Q8N612 972 aaPredicted RBP15.76■□□□□ 0.11
SMPD4-216ENST00000461187 LINC00301Q8NCQ3 95 aa15.76■□□□□ 0.11
SMPD4-216ENST00000461187 KBTBD7Q8WVZ9 684 aa15.76■□□□□ 0.11
SMPD4-216ENST00000461187 FUBP3Q96I24 572 aaKnown RBP eCLIP15.76■□□□□ 0.11
SMPD4-216ENST00000461187 SLC22A12Q96S37 553 aa15.76■□□□□ 0.11
SMPD4-216ENST00000461187 TNMDQ9H2S6 317 aa15.76■□□□□ 0.11
SMPD4-216ENST00000461187 FBRSL1Q9HCM7 1045 aaKnown RBP15.76■□□□□ 0.11
SMPD4-216ENST00000461187 SEMA4GQ9NTN9 838 aa15.76■□□□□ 0.11
SMPD4-216ENST00000461187 FOXD4L1Q9NU39 408 aa15.76■□□□□ 0.11
SMPD4-216ENST00000461187 KBTBD4Q9NVX7 518 aa15.76■□□□□ 0.11
SMPD4-216ENST00000461187 MAP1BP46821 2468 aaKnown RBP15.76■□□□□ 0.11
SMPD4-216ENST00000461187 DCDC2BA2VCK2 349 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 ZNF233A6NK53 670 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 STX6O43752 255 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 EGFP01133 1207 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 LMO2P25791 158 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 MAGEA11P43364 429 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 FAM160A1Q05DH4 1040 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 MYO1EQ12965 1108 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 MTF1Q14872 753 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 PDGFRLQ15198 375 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 STK38Q15208 465 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 ZNF77Q15935 545 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 CSRP2Q16527 193 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 CC2D1AQ6P1N0 951 aaPredicted RBP15.75■□□□□ 0.11
SMPD4-216ENST00000461187 PRR23CQ6ZRP0 262 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 SCN4BQ8IWT1 228 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 HPDLQ96IR7 371 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 CYP2S1Q96SQ9 504 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 GCNT4Q9P109 453 aa15.75■□□□□ 0.11
SMPD4-216ENST00000461187 EPG5Q9HCE0 2579 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms