RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 SLC39A13Q96H72 371 aa4.39□□□□□ -1.71
SPTLC1-203ENST00000461132 SMOQ99835 787 aa4.39□□□□□ -1.71
SPTLC1-203ENST00000461132 WDCPQ9H6R7 721 aa4.39□□□□□ -1.71
SPTLC1-203ENST00000461132 C1orf112Q9NSG2 853 aa4.39□□□□□ -1.71
SPTLC1-203ENST00000461132 KLC4Q9NSK0 619 aa4.39□□□□□ -1.71
SPTLC1-203ENST00000461132 SIDT1Q9NXL6 827 aaKnown RBP4.39□□□□□ -1.71
SPTLC1-203ENST00000461132 FLRT1Q9NZU1 646 aa4.39□□□□□ -1.71
SPTLC1-203ENST00000461132 CFAP97Q9P2B7 532 aa4.39□□□□□ -1.71
SPTLC1-203ENST00000461132 TAGLN3Q9UI15 199 aa4.39□□□□□ -1.71
SPTLC1-203ENST00000461132 ZNF804BA4D1E1 1349 aa4.39□□□□□ -1.71
SPTLC1-203ENST00000461132 LINC01548A6NM66 108 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 ZNF785A8K8V0 405 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 TBX3O15119 743 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 TCEA3O75764 348 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 ANXA1P04083 346 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 GNAI2P04899 355 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 PHKA1P46020 1223 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 FXR1P51114 621 aaKnown RBP eCLIP4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 MAP2K6P52564 334 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 HK3P52790 923 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 PSMC1P62191 440 aaKnown RBP4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 HLXQ14774 488 aaPredicted RBP4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 TMEM119Q4V9L6 283 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 INO80DQ53TQ3 878 aaPredicted RBP4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 MORC1Q86VD1 984 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 CPXCR1Q8N123 301 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 MYRIPQ8NFW9 859 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 HPS3Q969F9 1004 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 TIFAQ96CG3 184 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 FAM167AQ96KS9 214 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 KLHL32Q96NJ5 620 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 SCLT1Q96NL6 688 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 TPSD1Q9BZJ3 242 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 FAM204AQ9H8W3 233 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 SLC45A2Q9UMX9 530 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 FAM50BQ9Y247 325 aa4.38□□□□□ -1.71
SPTLC1-203ENST00000461132 F5H697 171 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 TRIAP1O43715 76 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 GJB1P08034 283 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 EBLN1P0CF75 366 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 KELP23276 732 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 ITPKBP27987 946 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 PRDX5P30044 214 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 NPTX2P47972 431 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 TUBA4AP68366 448 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 LMOD3Q0VAK6 560 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 EIF2B5Q13144 721 aaKnown RBP4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 ZNF267Q14586 743 aaPredicted RBP4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 ATAT1Q5SQI0 421 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 C1orf228Q6PIY5 440 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 ANKRD42Q8N9B4 389 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 NSUN7Q8NE18 718 aaKnown RBP4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 TMIEQ8NEW7 156 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 SEMA6DQ8NFY4 1073 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 DPF1Q92782 380 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 TRIM63Q969Q1 353 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 MTFMTQ96DP5 389 aaKnown RBP4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 C1GALT1C1Q96EU7 318 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 CDK5RAP3Q96JB5 506 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 PBKQ96KB5 322 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 FCRL4Q96PJ5 515 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 STRBPQ96SI9 672 aaKnown RBP4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 SENP7Q9BQF6 1050 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 ALG8Q9BVK2 526 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 SEMA4CQ9C0C4 833 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 SIK2Q9H0K1 926 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 NLRC4Q9NPP4 1024 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 PNPOQ9NVS9 261 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 RLIMQ9NVW2 624 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 PCDHA1Q9Y5I3 950 aa4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 ARHGEF17Q96PE2 2063 aaPredicted RBP4.37□□□□□ -1.71
SPTLC1-203ENST00000461132 SETD1BQ9UPS6 1966 aaKnown RBP4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 A0A0B4J269 797 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 WIPF3A6NGB9 483 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 NT5C1B-RDH14C9J2C7 533 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 E7ENX8 843 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 POLRMTO00411 1230 aaKnown RBP4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 FGAP02671 866 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 MYL3P08590 195 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 PRR35P0CG20 571 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 NR2F6P10588 404 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 TYRP14679 529 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 HOXB6P17509 224 aaKnown RBP4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 NDUFB7P17568 137 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 TRAPPC10P48553 1259 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 CCT8P50990 548 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 ZNF135P52742 658 aaPredicted RBP4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 AK2P54819 239 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 TAP2Q03519 686 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 TUBB3Q13509 450 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 TMEM95Q3KNT9 176 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 CCDC70Q6NSX1 233 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 TAPT1Q6NXT6 567 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 ZNF354CQ86Y25 554 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 PDSS2Q86YH6 399 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 CFAP52Q8N1V2 620 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 C9orf106Q8NAJ2 232 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 VPS37AQ8NEZ2 397 aa4.36□□□□□ -1.71
SPTLC1-203ENST00000461132 BRIX1Q8TDN6 353 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms