RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 PSMD5Q16401 504 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 ZNF280DQ6N043 979 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 UNQ6494/PRO21346Q6UXR6 183 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 ZNF852Q6ZMS4 543 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 GLYCTKQ8IVS8 523 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 ZC3H3Q8IXZ2 948 aaKnown RBP13.43□□□□□ -0.26
HDAC4-207ENST00000461113 ANKRD20A12PQ8NF67 263 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 PIK3R5Q8WYR1 880 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 SENP8Q96LD8 212 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 DUSP9Q99956 384 aaKnown RBP13.43□□□□□ -0.26
HDAC4-207ENST00000461113 DNAI2Q9GZS0 605 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 MMRN2Q9H8L6 949 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 TMEM8AQ9HCN3 771 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 CHST7Q9NS84 486 aa13.43□□□□□ -0.26
HDAC4-207ENST00000461113 M0QZQ0 153 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 TRIM21P19474 475 aaKnown RBP13.42□□□□□ -0.26
HDAC4-207ENST00000461113 TYMPP19971 482 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 TKTP29401 623 aaKnown RBP13.42□□□□□ -0.26
HDAC4-207ENST00000461113 PIK3CAP42336 1068 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 MTIF2P46199 727 aaKnown RBP13.42□□□□□ -0.26
HDAC4-207ENST00000461113 GCLMP48507 274 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 MXI1P50539 228 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 WNT7BP56706 349 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 CLDN10P78369 228 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 TYRO3Q06418 890 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 ADCY1Q08828 1119 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 NCOA4Q13772 614 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 NFKBIBQ15653 356 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 SGSM1Q2NKQ1 1148 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 CTXN3Q4LDR2 81 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 WDR44Q5JSH3 913 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 KRT39Q6A163 491 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 SV2AQ7L0J3 742 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 RNF168Q8IYW5 571 aaPredicted RBP13.42□□□□□ -0.26
HDAC4-207ENST00000461113 C3orf58Q8NDZ4 430 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 TAF4BQ92750 862 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 FGF13Q92913 245 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 MMS19Q96T76 1030 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 THAP9Q9H5L6 903 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 FNIP2Q9P278 1114 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 MRPS17Q9Y2R5 130 aaKnown RBP13.42□□□□□ -0.26
HDAC4-207ENST00000461113 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.42□□□□□ -0.26
HDAC4-207ENST00000461113 SNX9Q9Y5X1 595 aa13.42□□□□□ -0.26
HDAC4-207ENST00000461113 TM4SF5O14894 197 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 ZMYND10O75800 440 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 C4BPAP04003 597 aaKnown RBP13.41□□□□□ -0.26
HDAC4-207ENST00000461113 TRIM49P0CI25 452 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 TRIM49CP0CI26 452 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 PRKCSHP14314 528 aaPredicted RBP13.41□□□□□ -0.26
HDAC4-207ENST00000461113 AARSP49588 968 aaKnown RBP eCLIP13.41□□□□□ -0.26
HDAC4-207ENST00000461113 DLG4P78352 724 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 C1QBPQ07021 282 aaKnown RBP13.41□□□□□ -0.26
HDAC4-207ENST00000461113 ZNF699Q32M78 642 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 ZACNQ401N2 412 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 AASDHQ4L235 1098 aaPredicted RBP13.41□□□□□ -0.26
HDAC4-207ENST00000461113 ZNF667Q5HYK9 610 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 RTP2Q5QGT7 225 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 OVOS1Q6IE37 1185 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 LILRA6Q6PI73 481 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 DPH6Q7L8W6 267 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.41□□□□□ -0.26
HDAC4-207ENST00000461113 TMEM86AQ8N2M4 240 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 ENOX1Q8TC92 643 aaKnown RBP13.41□□□□□ -0.26
HDAC4-207ENST00000461113 ZNF516Q92618 1163 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 B3GALT6Q96L58 329 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 HEBP1Q9NRV9 189 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 BACE2Q9Y5Z0 518 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 PATJQ8NI35 1801 aa13.41□□□□□ -0.26
HDAC4-207ENST00000461113 CITO14578 2027 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 OR6C75A6NL08 312 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 SHISA7A6NL88 538 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 SMTNL1A8MU46 457 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 PPEF2O14830 753 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 HRO43593 1189 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 FOXD2O60548 495 aaPredicted RBP13.4□□□□□ -0.26
HDAC4-207ENST00000461113 CAVIN2O95810 425 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 EFEMP2O95967 443 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 C1RP00736 705 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 RPL17P18621 184 aaKnown RBP13.4□□□□□ -0.26
HDAC4-207ENST00000461113 ELF1P32519 619 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 LHX1P48742 406 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 LIMK1P53667 647 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 MYL6P60660 151 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 TPM4P67936 248 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 MYL7Q01449 175 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 SRSF5Q13243 272 aaKnown RBP13.4□□□□□ -0.26
HDAC4-207ENST00000461113 PPP2R5DQ14738 602 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 WDR72Q3MJ13 1102 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 TDRD10Q5VZ19 366 aaKnown RBP13.4□□□□□ -0.26
HDAC4-207ENST00000461113 PRSS55Q6UWB4 352 aaPredicted RBP13.4□□□□□ -0.26
HDAC4-207ENST00000461113 LRSAM1Q6UWE0 723 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 CD300LGQ6UXG3 332 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 TOP6BLQ8N6T0 577 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 KDF1Q8NAX2 398 aaPredicted RBP13.4□□□□□ -0.26
HDAC4-207ENST00000461113 ITFG1Q8TB96 612 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 LNX1Q8TBB1 728 aaPredicted RBP13.4□□□□□ -0.26
HDAC4-207ENST00000461113 SPATA18Q8TC71 538 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 PLEKHO2Q8TD55 490 aa13.4□□□□□ -0.26
HDAC4-207ENST00000461113 CNOT6LQ96LI5 555 aaKnown RBP13.4□□□□□ -0.26
HDAC4-207ENST00000461113 CHRDQ9H2X0 955 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms