RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 ACOT1Q86TX2 421 aa21.96■■□□□ 1.11
RPUSD3-210ENST00000460909 RNF135Q8IUD6 432 aa21.96■■□□□ 1.11
RPUSD3-210ENST00000460909 CREBRFQ8IUR6 639 aa21.96■■□□□ 1.11
RPUSD3-210ENST00000460909 FAM114A1Q8IWE2 563 aa21.96■■□□□ 1.11
RPUSD3-210ENST00000460909 TDRD5Q8NAT2 981 aaKnown RBP21.96■■□□□ 1.11
RPUSD3-210ENST00000460909 EHBP1Q8NDI1 1231 aa21.96■■□□□ 1.11
RPUSD3-210ENST00000460909 KHSRPQ92945 711 aaKnown RBP eCLIP21.96■■□□□ 1.11
RPUSD3-210ENST00000460909 DLL1O00548 723 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 MOSPD3O75425 235 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 CD58P19256 250 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 BDNFP23560 247 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 MTIF2P46199 727 aaKnown RBP21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 CYP27A1Q02318 531 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 CUL2Q13617 745 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 DDR2Q16832 855 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 CDKAL1Q5VV42 579 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 VSTM1Q6UX27 236 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 PLCD3Q8N3E9 789 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 GPR152Q8TDT2 470 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 ACSF2Q96CM8 615 aaPredicted RBP21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 TCEAL4Q96EI5 215 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 FUCA2Q9BTY2 467 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 FAM124BQ9H5Z6 455 aaPredicted RBP21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 ZNF334Q9HCZ1 680 aaPredicted RBP21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 CISHQ9NSE2 258 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 TMEM30AQ9NV96 361 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 EPS15L1Q9UBC2 864 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 MYO10Q9HD67 2058 aa21.95■■□□□ 1.1
RPUSD3-210ENST00000460909 GREB1Q4ZG55 1949 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 TNFRSF10AO00220 468 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 MICAL2O94851 1124 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 LAMP2P13473 410 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 HMGA1P17096 107 aaKnown RBP21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 GBP2P32456 591 aaPredicted RBP21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 CACNA2D1P54289 1103 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 RPL10AP62906 217 aaKnown RBP21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 CETN1Q12798 172 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 LRMPQ12912 555 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 MAN2A1Q16706 1144 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 MIIPQ5JXC2 388 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 SDHAF4Q5VUM1 108 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 ITIH5Q86UX2 942 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 FUKQ8N0W3 1084 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 UBR7Q8N806 425 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 C12orf29Q8N999 325 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 LEMD2Q8NC56 503 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 GIPC2Q8TF65 315 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 FGF13Q92913 245 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 NT5C1AQ9BXI3 368 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 ZNF518BQ9C0D4 1074 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 ELOVL4Q9GZR5 314 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 ASAH2Q9NR71 780 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 CDH7Q9ULB5 785 aa21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 MRPS23Q9Y3D9 190 aaKnown RBP21.94■■□□□ 1.1
RPUSD3-210ENST00000460909 KCNJ18B7U540 433 aa21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 CLDN5O00501 218 aa21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 CEBPBP17676 345 aa21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 KCNJ12Q14500 433 aa21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 VEPH1Q14D04 833 aa21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 TCP11X2Q5H9J9 407 aa21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 CYP4A22Q5TCH4 519 aa21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 PDZD4Q76G19 769 aaPredicted RBP21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 NPAS3Q8IXF0 933 aa21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 TTC39CQ8N584 583 aa21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 STKLD1Q8NE28 680 aa21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 NT5C1BQ96P26 610 aa21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 TUBGCP2Q9BSJ2 902 aa21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 INTS2Q9H0H0 1204 aaKnown RBP21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 IL21Q9HBE4 155 aa21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 LIMD1Q9UGP4 676 aa21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 ZFP37Q9Y6Q3 630 aaPredicted RBP21.93■■□□□ 1.1
RPUSD3-210ENST00000460909 ZNF197O14709 1029 aa21.92■■□□□ 1.1
RPUSD3-210ENST00000460909 LETM1O95202 739 aaPredicted RBP21.92■■□□□ 1.1
RPUSD3-210ENST00000460909 MYL4P12829 197 aa21.92■■□□□ 1.1
RPUSD3-210ENST00000460909 EEF1GP26641 437 aaKnown RBP21.92■■□□□ 1.1
RPUSD3-210ENST00000460909 RAD23BP54727 409 aa21.92■■□□□ 1.1
RPUSD3-210ENST00000460909 MYL5Q02045 173 aa21.92■■□□□ 1.1
RPUSD3-210ENST00000460909 MTMR3Q13615 1198 aa21.92■■□□□ 1.1
RPUSD3-210ENST00000460909 NCAPHQ15003 741 aa21.92■■□□□ 1.1
RPUSD3-210ENST00000460909 ANO6Q4KMQ2 910 aa21.92■■□□□ 1.1
RPUSD3-210ENST00000460909 GAREM2Q75VX8 874 aa21.92■■□□□ 1.1
RPUSD3-210ENST00000460909 SCN4BQ8IWT1 228 aa21.92■■□□□ 1.1
RPUSD3-210ENST00000460909 FAM200AQ8TCP9 573 aa21.92■■□□□ 1.1
RPUSD3-210ENST00000460909 ING5Q8WYH8 240 aa21.92■■□□□ 1.1
RPUSD3-210ENST00000460909 FANCLQ9NW38 375 aa21.92■■□□□ 1.1
RPUSD3-210ENST00000460909 DENND4CQ5VZ89 1909 aa21.91■■□□□ 1.1
RPUSD3-210ENST00000460909 GTPBP10A4D1E9 387 aaKnown RBP21.91■■□□□ 1.1
RPUSD3-210ENST00000460909 NOL4O94818 638 aa21.91■■□□□ 1.1
RPUSD3-210ENST00000460909 CCDC130P13994 396 aa21.91■■□□□ 1.1
RPUSD3-210ENST00000460909 ACO1P21399 889 aaKnown RBP21.91■■□□□ 1.1
RPUSD3-210ENST00000460909 TBXAS1P24557 533 aaPredicted RBP21.91■■□□□ 1.1
RPUSD3-210ENST00000460909 GRIK1P39086 918 aa21.91■■□□□ 1.1
RPUSD3-210ENST00000460909 SKOR2Q2VWA4 1001 aaPredicted RBP21.91■■□□□ 1.1
RPUSD3-210ENST00000460909 VWA3BQ502W6 1294 aa21.91■■□□□ 1.1
RPUSD3-210ENST00000460909 PHLDB3Q6NSJ2 640 aa21.91■■□□□ 1.1
RPUSD3-210ENST00000460909 FAM35AQ86V20 835 aa21.91■■□□□ 1.1
RPUSD3-210ENST00000460909 ARHGEF19Q8IW93 802 aa21.91■■□□□ 1.1
RPUSD3-210ENST00000460909 SLC4A11Q8NBS3 891 aa21.91■■□□□ 1.1
RPUSD3-210ENST00000460909 SHKBP1Q8TBC3 707 aa21.91■■□□□ 1.1
RPUSD3-210ENST00000460909 KAT5Q92993 513 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms