RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 DMC1Q14565 340 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 SEC23AQ15436 765 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 PTPN21Q16825 1174 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 QRICH1Q2TAL8 776 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 LPCAT2Q7L5N7 544 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 STK32AQ8WU08 396 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 E2F7Q96AV8 911 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 PLGRKTQ9HBL7 147 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 HMG20AQ9NP66 347 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 TUBGCP4Q9UGJ1 667 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 FBXO2Q9UK22 296 aaPredicted RBP10.17□□□□□ -0.78
UFD1-205ENST00000459854 RWDD3Q9Y3V2 267 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 SNCAIPQ9Y6H5 919 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 H7C0S8 307 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 CES2O00748 559 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 RAD51CO43502 376 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 BCL10O95999 233 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 ATP4AP20648 1035 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 EPS8Q12929 822 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 ARMC3Q5W041 872 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 OR6B2Q6IFH4 312 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 RBBP8Q99708 897 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 KLHL31Q9H511 634 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 MCM8Q9UJA3 840 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 SLCO1B7G3V0H7 640 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 DTNBO60941 627 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 S100A9P06702 114 aaKnown RBP10.17□□□□□ -0.78
UFD1-205ENST00000459854 KNOP1Q1ED39 458 aaKnown RBP10.17□□□□□ -0.78
UFD1-205ENST00000459854 NLRP9Q7RTR0 991 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 ANKRD23Q86SG2 305 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 MYLK4Q86YV6 388 aaPredicted RBP10.17□□□□□ -0.78
UFD1-205ENST00000459854 CCNYL1Q8N7R7 359 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 STKLD1Q8NE28 680 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 FLCNQ8NFG4 579 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 ATG4CQ96DT6 458 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 RMI1Q9H9A7 625 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 IL17RBQ9NRM6 502 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 PARVAQ9NVD7 372 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 DAPK2Q9UIK4 370 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 PHTF1Q9UMS5 762 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 TLL2Q9Y6L7 1015 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 CCDC88AQ3V6T2 1871 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 MYPNQ86TC9 1320 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 CCDC195A0A1B0GUA6 201 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 TYW5A2RUC4 315 aaKnown RBP10.17□□□□□ -0.78
UFD1-205ENST00000459854 KIAA0391O15091 583 aaKnown RBP10.17□□□□□ -0.78
UFD1-205ENST00000459854 RHOBTB1O94844 696 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 ALOX5P09917 674 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 TMEM253P0C7T8 217 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 NPEPPSP55786 919 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 ILF2Q12905 390 aaKnown RBP10.17□□□□□ -0.78
UFD1-205ENST00000459854 IMPG1Q17R60 797 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 P3H2Q8IVL5 708 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 ARL8AQ96BM9 186 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 GORASP1Q9BQQ3 440 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 GOLGA8RI6L899 631 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 COBLO75128 1261 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 TSPAN9O75954 239 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 WFS1O76024 890 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 FTLP02792 175 aaPredicted RBP10.16□□□□□ -0.78
UFD1-205ENST00000459854 RALBP11234 206 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 DSG3P32926 999 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 ARSEP51690 589 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 HERVK_113P62684 666 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 TROAPQ12815 778 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 CCDC85BQ15834 202 aaPredicted RBP10.16□□□□□ -0.78
UFD1-205ENST00000459854 PFKFB3Q16875 520 aaPredicted RBP10.16□□□□□ -0.78
UFD1-205ENST00000459854 EFHC1Q5JVL4 640 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 TMPRSS6Q8IU80 811 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 NDUFAF2Q8N183 169 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 XXYLT1Q8NBI6 393 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 EPAS1Q99814 870 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 MROH8Q9H579 483 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 RUBCNLQ9H714 662 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 CLIC2O15247 247 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 XIAPP98170 497 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 ITGA9Q13797 1035 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 SNX17Q15036 470 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 PLEKHA7Q6IQ23 1121 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 TTC27Q6P3X3 843 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 IZUMO2Q6UXV1 221 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 FUKQ8N0W3 1084 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 FBXL16Q8N461 479 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 BEST2Q8NFU1 509 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 SNX19Q92543 992 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 INTS2Q9H0H0 1204 aaKnown RBP10.16□□□□□ -0.78
UFD1-205ENST00000459854 TAF6LQ9Y6J9 622 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 MYH13Q9UKX3 1938 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 PDZK1P1A8MUH7 402 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 DNALI1O14645 258 aaPredicted RBP10.16□□□□□ -0.78
UFD1-205ENST00000459854 TM9SF1O15321 606 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 MED26O95402 600 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 RARGP13631 454 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 ATP6V1B1P15313 513 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 OAZ1P54368 228 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 VCPP55072 806 aaKnown RBP10.16□□□□□ -0.78
UFD1-205ENST00000459854 GEMIN4P57678 1058 aaKnown RBP10.16□□□□□ -0.78
UFD1-205ENST00000459854 TAB1Q15750 504 aa10.16□□□□□ -0.78
UFD1-205ENST00000459854 HEATR6Q6AI08 1181 aaKnown RBP10.16□□□□□ -0.78
UFD1-205ENST00000459854 NANOGNBQ7Z5D8 188 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms