RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 ING5Q8WYH8 240 aa17.21■□□□□ 0.35
CD28-203ENST00000458610 MYLPFQ96A32 169 aa17.21■□□□□ 0.35
CD28-203ENST00000458610 E2F7Q96AV8 911 aa17.21■□□□□ 0.35
CD28-203ENST00000458610 PCED1BQ96HM7 432 aa17.21■□□□□ 0.35
CD28-203ENST00000458610 LPIN3Q9BQK8 851 aa17.21■□□□□ 0.35
CD28-203ENST00000458610 ELOVL4Q9GZR5 314 aa17.21■□□□□ 0.35
CD28-203ENST00000458610 ATXN3LQ9H3M9 355 aa17.21■□□□□ 0.35
CD28-203ENST00000458610 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.21■□□□□ 0.35
CD28-203ENST00000458610 SOBPA7XYQ1 873 aa17.2■□□□□ 0.34
CD28-203ENST00000458610 HCRTO43612 131 aa17.2■□□□□ 0.34
CD28-203ENST00000458610 BDNFP23560 247 aa17.2■□□□□ 0.34
CD28-203ENST00000458610 GABRR2P28476 465 aa17.2■□□□□ 0.34
CD28-203ENST00000458610 ASPAP45381 313 aa17.2■□□□□ 0.34
CD28-203ENST00000458610 FMO5P49326 533 aa17.2■□□□□ 0.34
CD28-203ENST00000458610 YWHAEP62258 255 aaKnown RBP17.2■□□□□ 0.34
CD28-203ENST00000458610 HTR4Q13639 388 aa17.2■□□□□ 0.34
CD28-203ENST00000458610 DDR2Q16832 855 aa17.2■□□□□ 0.34
CD28-203ENST00000458610 FAM114A1Q8IWE2 563 aa17.2■□□□□ 0.34
CD28-203ENST00000458610 GPT2Q8TD30 523 aa17.2■□□□□ 0.34
CD28-203ENST00000458610 SPATA17Q96L03 361 aa17.2■□□□□ 0.34
CD28-203ENST00000458610 NT5C1AQ9BXI3 368 aa17.2■□□□□ 0.34
CD28-203ENST00000458610 LRRC3Q9BY71 257 aa17.2■□□□□ 0.34
CD28-203ENST00000458610 SLITRK6Q9H5Y7 841 aa17.2■□□□□ 0.34
CD28-203ENST00000458610 C2orf16Q68DN1 1984 aa17.2■□□□□ 0.34
CD28-203ENST00000458610 TSC2P49815 1807 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 A0A1W2PRU2 124 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 PRR33A8MZF0 331 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 ECI2O75521 394 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 PRKCSHP14314 528 aaPredicted RBP17.19■□□□□ 0.34
CD28-203ENST00000458610 CEBPBP17676 345 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 RAP1GAPP47736 663 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 CDR1P51861 262 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 NDST1P52848 882 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 INCA1Q0VD86 236 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 CBWD6Q4V339 395 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 CBWD3Q5JTY5 395 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 CBWD5Q5RIA9 395 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 SASS6Q6UVJ0 657 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 TMC8Q8IU68 726 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 CREBRFQ8IUR6 639 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 SEMA4DQ92854 862 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 TCEAL4Q96EI5 215 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 C8orf48Q96LL4 319 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 MED10Q9BTT4 135 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 SDCBP2Q9H190 292 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 APOBEC3GQ9HC16 384 aaKnown RBP17.19■□□□□ 0.34
CD28-203ENST00000458610 ZFP14Q9HCL3 533 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 NUMBLQ9Y6R0 609 aa17.19■□□□□ 0.34
CD28-203ENST00000458610 DENND4AQ7Z401 1863 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 A0A0C4DFX4 3053 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 SLC38A8A6NNN8 435 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 NOL4O94818 638 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 AFPP02771 609 aaKnown RBP17.18■□□□□ 0.34
CD28-203ENST00000458610 TBXAS1P24557 533 aaPredicted RBP17.18■□□□□ 0.34
CD28-203ENST00000458610 DDX6P26196 483 aaKnown RBP eCLIP17.18■□□□□ 0.34
CD28-203ENST00000458610 CCR2P41597 374 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 TEAD2Q15562 447 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 PARM1Q6UWI2 310 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 ACOT1Q86TX2 421 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 TRIM59Q8IWR1 403 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 SHKBP1Q8TBC3 707 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 MRPS31Q92665 395 aaKnown RBP17.18■□□□□ 0.34
CD28-203ENST00000458610 SMARCD2Q92925 531 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 ELSPBP1Q96BH3 223 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 TRMT2BQ96GJ1 504 aaKnown RBP17.18■□□□□ 0.34
CD28-203ENST00000458610 MYRFLQ96LU7 910 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 B3GNT5Q9BYG0 378 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 DPEP3Q9H4B8 488 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 THAP9Q9H5L6 903 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.18■□□□□ 0.34
CD28-203ENST00000458610 MAGED2Q9UNF1 606 aaPredicted RBP17.18■□□□□ 0.34
CD28-203ENST00000458610 DUSP12Q9UNI6 340 aa17.18■□□□□ 0.34
CD28-203ENST00000458610 XIRP2A4UGR9 3374 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 TMEM221A6NGB7 291 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 M0R296 226 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 CILPO75339 1184 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 MOSPD3O75425 235 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 SRFP11831 508 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 HMGA1P17096 107 aaKnown RBP17.17■□□□□ 0.34
CD28-203ENST00000458610 CD58P19256 250 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 PTMSP20962 102 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 KCNH2Q12809 1159 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 DPCR1Q3MIW9 517 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 CCDC183Q5T5S1 534 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 GPR158Q5T848 1215 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 DENND5BQ6ZUT9 1274 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 GAREM2Q75VX8 874 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 BMP8AQ7Z5Y6 402 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 ZSCAN18Q8TBC5 510 aaPredicted RBP17.17■□□□□ 0.34
CD28-203ENST00000458610 GPR152Q8TDT2 470 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 RSAD2Q8WXG1 361 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 FGF14Q92915 247 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 ELMO3Q96BJ8 720 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 SMARCD1Q96GM5 515 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 ASB16Q96NS5 453 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 NT5C1BQ96P26 610 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 TASP1Q9H6P5 420 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 ZNF334Q9HCZ1 680 aaPredicted RBP17.17■□□□□ 0.34
CD28-203ENST00000458610 WNT16Q9UBV4 365 aa17.17■□□□□ 0.34
CD28-203ENST00000458610 FBXL21Q9UKT6 434 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms