RNA–Protein interactions for RNA: ENST00000458478.5

RPSA-204, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-204ENST00000458478 RAB23Q9ULC3 237 aa12.1□□□□□ -0.47
RPSA-204ENST00000458478 USP18Q9UMW8 372 aa12.1□□□□□ -0.47
RPSA-204ENST00000458478 PTPRJQ12913 1337 aa12.1□□□□□ -0.47
RPSA-204ENST00000458478 ZNF638Q14966 1978 aaKnown RBP12.09□□□□□ -0.47
RPSA-204ENST00000458478 ZNF233A6NK53 670 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 PRR5-ARHGAP8B1AHC4 643 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 ATP2C2O75185 946 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 NOL4O94818 638 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 RETP07949 1114 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 TMEM191BP0C7N4 346 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 SDHBP21912 280 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 LMO2P25791 158 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 CNR2P34972 360 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 LHX1P48742 406 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 RPL10AP62906 217 aaKnown RBP12.09□□□□□ -0.47
RPSA-204ENST00000458478 ARHGAP8P85298 464 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 STK38Q15208 465 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 E2F4Q16254 413 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 TMEM196Q5HYL7 178 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 FSTL4Q6MZW2 842 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 PKN3Q6P5Z2 889 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 FAM171BQ6P995 826 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 DPH6Q7L8W6 267 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 LIMS2Q7Z4I7 341 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 CBWD2Q8IUF1 395 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 ADGRF2Q8IZF7 708 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 SPATA18Q8TC71 538 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 TRMT2BQ96GJ1 504 aaKnown RBP12.09□□□□□ -0.47
RPSA-204ENST00000458478 ANKRD36BP1Q96IX9 119 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 MYRFLQ96LU7 910 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 FBRSL1Q9HCM7 1045 aaKnown RBP12.09□□□□□ -0.47
RPSA-204ENST00000458478 KBTBD4Q9NVX7 518 aa12.09□□□□□ -0.47
RPSA-204ENST00000458478 TRDMT1O14717 391 aaKnown RBP12.08□□□□□ -0.48
RPSA-204ENST00000458478 KIAA0391O15091 583 aaKnown RBP12.08□□□□□ -0.48
RPSA-204ENST00000458478 SPTLC2O15270 562 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 PPP6R2O75170 966 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 TADA3O75528 432 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 CST3P01034 146 aaPredicted RBP12.08□□□□□ -0.48
RPSA-204ENST00000458478 ARSAP15289 507 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 HOXA6P31267 233 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 GALK1P51570 392 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 LMNB2Q03252 620 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 MYO1EQ12965 1108 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 ZNF268Q14587 947 aaPredicted RBP12.08□□□□□ -0.48
RPSA-204ENST00000458478 DUOXA2Q1HG44 320 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 CFAP221Q4G0U5 840 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 SPATA2LQ8IUW3 424 aaPredicted RBP12.08□□□□□ -0.48
RPSA-204ENST00000458478 SCN4BQ8IWT1 228 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 RDH13Q8NBN7 331 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 ZNF507Q8TCN5 953 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 KBTBD7Q8WVZ9 684 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 HPDLQ96IR7 371 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 SLC22A12Q96S37 553 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 TRIM9Q9C026 710 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 LRRC27Q9C0I9 530 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 TNMDQ9H2S6 317 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 KIF9Q9HAQ2 790 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 HSPBP1Q9NZL4 362 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 UXTQ9UBK9 157 aaPredicted RBP12.08□□□□□ -0.48
RPSA-204ENST00000458478 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.08□□□□□ -0.48
RPSA-204ENST00000458478 OBSL1O75147 1896 aa12.08□□□□□ -0.48
RPSA-204ENST00000458478 K7ELQ4 463 aaPredicted RBP12.07□□□□□ -0.48
RPSA-204ENST00000458478 TGFB1I1O43294 461 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 EGFP01133 1207 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 TNNC2P02585 160 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 PDGFRBP09619 1106 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 PCSK1P29120 753 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 GRSF1Q12849 480 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPSA-204ENST00000458478 SURF1Q15526 300 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 NAIF1Q69YI7 327 aaPredicted RBP12.07□□□□□ -0.48
RPSA-204ENST00000458478 CC2D1AQ6P1N0 951 aaPredicted RBP12.07□□□□□ -0.48
RPSA-204ENST00000458478 SHC4Q6S5L8 630 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 STXBP4Q6ZWJ1 553 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 EPM2AIP1Q7L775 607 aaPredicted RBP12.07□□□□□ -0.48
RPSA-204ENST00000458478 WDR5BQ86VZ2 330 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 DHX58Q96C10 678 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 FUBP3Q96I24 572 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPSA-204ENST00000458478 BACH2Q9BYV9 841 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 CUEDC2Q9H467 287 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 KIAA1586Q9HCI6 787 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 TRPC7Q9HCX4 862 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 CRTAC1Q9NQ79 661 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 POLR3BQ9NW08 1133 aaPredicted RBP12.07□□□□□ -0.48
RPSA-204ENST00000458478 GCNT4Q9P109 453 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 MAGEC2Q9UBF1 373 aaPredicted RBP12.07□□□□□ -0.48
RPSA-204ENST00000458478 CDH9Q9ULB4 789 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 R3HCC1Q9Y3T6 440 aaKnown RBP12.07□□□□□ -0.48
RPSA-204ENST00000458478 ATG2BQ96BY7 2078 aa12.07□□□□□ -0.48
RPSA-204ENST00000458478 DCDC2BA2VCK2 349 aa12.06□□□□□ -0.48
RPSA-204ENST00000458478 EIF3DO15371 548 aaKnown RBP eCLIP12.06□□□□□ -0.48
RPSA-204ENST00000458478 LRP3O75074 770 aa12.06□□□□□ -0.48
RPSA-204ENST00000458478 USP17L7P0C7H9 530 aa12.06□□□□□ -0.48
RPSA-204ENST00000458478 WARSP23381 471 aaKnown RBP12.06□□□□□ -0.48
RPSA-204ENST00000458478 BDNFP23560 247 aa12.06□□□□□ -0.48
RPSA-204ENST00000458478 GJA4P35212 333 aa12.06□□□□□ -0.48
RPSA-204ENST00000458478 MAGEA11P43364 429 aa12.06□□□□□ -0.48
RPSA-204ENST00000458478 PXNP49023 591 aaPredicted RBP12.06□□□□□ -0.48
RPSA-204ENST00000458478 PSMC1P62191 440 aaKnown RBP12.06□□□□□ -0.48
RPSA-204ENST00000458478 AMPD3Q01432 767 aa12.06□□□□□ -0.48
RPSA-204ENST00000458478 AMPD2Q01433 879 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms