RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 PDIA5Q14554 519 aa10.18□□□□□ -0.78
MSC-AS1-201ENST00000457356 KPNB1Q14974 876 aaKnown RBP10.18□□□□□ -0.78
MSC-AS1-201ENST00000457356 PRCCQ92733 491 aaPredicted RBP10.18□□□□□ -0.78
MSC-AS1-201ENST00000457356 TRIM15Q9C019 465 aa10.18□□□□□ -0.78
MSC-AS1-201ENST00000457356 RPF1Q9H9Y2 349 aaKnown RBP10.18□□□□□ -0.78
MSC-AS1-201ENST00000457356 CYP26B1Q9NR63 512 aa10.18□□□□□ -0.78
MSC-AS1-201ENST00000457356 ERAP1Q9NZ08 941 aa10.18□□□□□ -0.78
MSC-AS1-201ENST00000457356 C15orf41Q9Y2V0 281 aa10.18□□□□□ -0.78
MSC-AS1-201ENST00000457356 TRPM3Q9HCF6 1732 aaPredicted RBP10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 NWD2Q9ULI1 1742 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 MSCO60682 206 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 NPM3O75607 178 aaKnown RBP10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 KRT75O95678 551 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 SUPT20HL2P0C7V6 817 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 MYBP10242 640 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 RBP3P10745 1247 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 IFI35P80217 286 aaPredicted RBP10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 CNTN2Q02246 1040 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 UBE3AQ05086 875 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 SNX30Q5VWJ9 437 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 ARMCX2Q7L311 632 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 TRIM74Q86UV6 250 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 TRIM73Q86UV7 250 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 E2F7Q96AV8 911 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 DNAJC7Q99615 494 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 KDM4CQ9H3R0 1056 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 CACYBPQ9HB71 228 aaKnown RBP10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 OSGEPQ9NPF4 335 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 TMEM39AQ9NV64 488 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 DDX18Q9NVP1 670 aaKnown RBP10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 CHCHD3Q9NX63 227 aaKnown RBP10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 GTPBP10A4D1E9 387 aaKnown RBP10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 KCNN4O15554 427 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 ZBTB24O43167 697 aaPredicted RBP10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 ATP9AO75110 1047 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 TROAPQ12815 778 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 KCTD21Q4G0X4 260 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 TREML2Q5T2D2 321 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 KLHDC7AQ5VTJ3 777 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 DAB2IPQ5VWQ8 1189 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 DDIASQ8IXT1 998 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 GFM2Q969S9 779 aaKnown RBP10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 TMEM237Q96Q45 408 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 KIFC3Q9BVG8 833 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 FAM129AQ9BZQ8 928 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 PKD2L2Q9NZM6 624 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 V9GYQ6 96 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 STK25O00506 426 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 ARHGEF9O43307 516 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 BNIP3LO60238 219 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 RALAP11233 206 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 PRLRP16471 622 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 HIRAP54198 1017 aaPredicted RBP10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 MAP2K5Q13163 448 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 FAM110CQ1W6H9 321 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 ZNF699Q32M78 642 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 SLFN12LQ6IEE8 588 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 GPR142Q7Z601 462 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 SLC13A5Q86YT5 568 aaPredicted RBP10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 REEP2Q9BRK0 252 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 LXNQ9BS40 222 aa10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 MRPL40Q9NQ50 206 aaKnown RBP10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 CPSF3Q9UKF6 684 aaKnown RBP10.17□□□□□ -0.78
MSC-AS1-201ENST00000457356 GPR25O00155 361 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 THPOP40225 353 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 VCPP55072 806 aaKnown RBP10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 KCNA1Q09470 495 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 CHI3L2Q15782 390 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 C6orf10Q5SRN2 563 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 ANKRD23Q86SG2 305 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 SLC25A41Q8N5S1 370 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 AFG1LQ8WV93 481 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 SPIRE2Q8WWL2 714 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 SERPINB12Q96P63 405 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 IL1RL2Q9HB29 575 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 SARS2Q9NP81 518 aaKnown RBP10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 CREBZFQ9NS37 354 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 HSPBP1Q9NZL4 362 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 UVRAGQ9P2Y5 699 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 TSR3Q9UJK0 312 aaKnown RBP10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 SLC15A5A6NIM6 579 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 MAFGO15525 162 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 CST8O60676 142 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 MAP3K6O95382 1288 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 TMEM253P0C7T8 217 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 RARGP13631 454 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 PRAMEF19Q5SWL8 479 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 IZUMO2Q6UXV1 221 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 CLEC4FQ8N1N0 589 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 CATSPER1Q8NEC5 780 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 ACSF2Q96CM8 615 aaPredicted RBP10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 CMTM5Q96DZ9 223 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 MTRQ99707 1265 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 TINF2Q9BSI4 451 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 CDC42EP4Q9H3Q1 356 aaKnown RBP10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 TOPORSQ9NS56 1045 aaPredicted RBP10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 XPO7Q9UIA9 1087 aaKnown RBP10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 A0A1W2PQJ5 194 aa10.16□□□□□ -0.78
MSC-AS1-201ENST00000457356 TRIM49D1C9J1S8 452 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms