RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 DCAKDQ8WVC6 231 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 GFM2Q969S9 779 aaKnown RBP14.78□□□□□ -0.04
TOP3B-214ENST00000457270 TRIM11Q96F44 468 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 RBM38Q9H0Z9 239 aaKnown RBP14.78□□□□□ -0.04
TOP3B-214ENST00000457270 C12orf65Q9H3J6 166 aaKnown RBP14.78□□□□□ -0.04
TOP3B-214ENST00000457270 PLK2Q9NYY3 685 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 BCS1LQ9Y276 419 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 TDRKHQ9Y2W6 561 aaKnown RBP14.78□□□□□ -0.04
TOP3B-214ENST00000457270 TMEM247A6NEH6 219 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 CDK4P11802 303 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 MCCD1P59942 119 aaPredicted RBP14.78□□□□□ -0.04
TOP3B-214ENST00000457270 GPS1Q13098 491 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 USH1GQ495M9 461 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 C1orf228Q6PIY5 440 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 RBM44Q6ZP01 1051 aaKnown RBP14.78□□□□□ -0.04
TOP3B-214ENST00000457270 TRIM67Q6ZTA4 783 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 MCOLN2Q8IZK6 566 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 ATP11CQ8NB49 1132 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 APOPT1Q96IL0 206 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 CCDC106Q9BWC9 280 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 ALG13Q9NP73 1137 aaKnown RBP14.78□□□□□ -0.04
TOP3B-214ENST00000457270 DRG1Q9Y295 367 aaKnown RBP14.78□□□□□ -0.04
TOP3B-214ENST00000457270 PPME1Q9Y570 386 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 PCDHA1Q9Y5I3 950 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 RBBP6Q7Z6E9 1792 aaKnown RBP14.78□□□□□ -0.04
TOP3B-214ENST00000457270 SBF2Q86WG5 1849 aa14.78□□□□□ -0.04
TOP3B-214ENST00000457270 ABCA3Q99758 1704 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 A0A088AWK7 358 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 DENND3A2RUS2 1198 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 BGNP21810 368 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 SREBF1P36956 1147 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 MXI1P50539 228 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 ERFP50548 548 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 EMP3P54852 163 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 MTTPP55157 894 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 NOP14P78316 857 aaKnown RBP14.77□□□□□ -0.04
TOP3B-214ENST00000457270 DCTN2Q13561 401 aaKnown RBP14.77□□□□□ -0.04
TOP3B-214ENST00000457270 EFTUD2Q15029 972 aaKnown RBP eCLIP14.77□□□□□ -0.041e-7■■■■■ 52.3
TOP3B-214ENST00000457270 MAP7D1Q3KQU3 841 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 HSP90AA5PQ58FG0 334 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 EFHC1Q5JVL4 640 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 ODR4Q5SWX8 454 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 KLHDC10Q6PID8 442 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 RNF111Q6ZNA4 994 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 PTF1AQ7RTS3 328 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 PPM1KQ8N3J5 372 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 C7orf26Q96N11 449 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 MPHOSPH6Q99547 160 aaKnown RBP14.77□□□□□ -0.04
TOP3B-214ENST00000457270 TMEM117Q9H0C3 514 aa14.77□□□□□ -0.04
TOP3B-214ENST00000457270 CASQ2O14958 399 aaPredicted RBP14.77□□□□□ -0.05
TOP3B-214ENST00000457270 SLITRK3O94933 977 aa14.77□□□□□ -0.05
TOP3B-214ENST00000457270 TFAP2AP05549 437 aa14.77□□□□□ -0.05
TOP3B-214ENST00000457270 UNGP13051 313 aaPredicted RBP14.77□□□□□ -0.05
TOP3B-214ENST00000457270 AKR1B1P15121 316 aa14.77□□□□□ -0.05
TOP3B-214ENST00000457270 GLRA2P23416 452 aa14.77□□□□□ -0.05
TOP3B-214ENST00000457270 GSTM4Q03013 218 aa14.77□□□□□ -0.05
TOP3B-214ENST00000457270 SLC18A2Q05940 514 aa14.77□□□□□ -0.05
TOP3B-214ENST00000457270 TFDP1Q14186 410 aa14.77□□□□□ -0.05
TOP3B-214ENST00000457270 QRICH1Q2TAL8 776 aa14.77□□□□□ -0.05
TOP3B-214ENST00000457270 HSF5Q4G112 596 aaPredicted RBP14.77□□□□□ -0.05
TOP3B-214ENST00000457270 GAB3Q8WWW8 586 aa14.77□□□□□ -0.05
TOP3B-214ENST00000457270 JADE3Q92613 823 aa14.77□□□□□ -0.05
TOP3B-214ENST00000457270 P2RX7Q99572 595 aaKnown RBP14.77□□□□□ -0.05
TOP3B-214ENST00000457270 WWP1Q9H0M0 922 aa14.77□□□□□ -0.05
TOP3B-214ENST00000457270 C15orf38-AP3S2A0A0A6YYH1 394 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 IPO5O00410 1097 aaKnown RBP14.76□□□□□ -0.05
TOP3B-214ENST00000457270 ZSCAN5DPP0CG00 497 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 CPA3P15088 417 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 CPOXP36551 454 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 IRX4P78413 519 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 GABPAQ06546 454 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 CIAPIN1Q6FI81 312 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 LRRC8BQ6P9F7 803 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 ARPINQ7Z6K5 226 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 MARVELD2Q8N4S9 558 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 GDPD5Q8WTR4 605 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 ZFRQ96KR1 1074 aaKnown RBP14.76□□□□□ -0.05
TOP3B-214ENST00000457270 SETDB2Q96T68 719 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 PPARGC1AQ9UBK2 798 aaKnown RBP14.76□□□□□ -0.05
TOP3B-214ENST00000457270 ADAMTS6Q9UKP5 1117 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 DNPEPQ9ULA0 475 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 DMTF1Q9Y222 760 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 DCAF8L1A6NGE4 600 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 GOLGA8RI6L899 631 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 DENRO43583 198 aaKnown RBP14.76□□□□□ -0.05
TOP3B-214ENST00000457270 CCNT2O60583 730 aaKnown RBP14.76□□□□□ -0.05
TOP3B-214ENST00000457270 TSHRP16473 764 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 EIF6P56537 245 aaKnown RBP14.76□□□□□ -0.05
TOP3B-214ENST00000457270 RHBDL3P58872 404 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 KDSRQ06136 332 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 HIC1Q14526 733 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 HIF1AQ16665 826 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 HELQQ8TDG4 1101 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 AGAP3Q96P47 875 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 TBCCD1Q9NVR7 557 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 SOX13Q9UN79 622 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 ZNF148Q9UQR1 794 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 E5RJQ4 531 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 PGM3O95394 542 aa14.76□□□□□ -0.05
TOP3B-214ENST00000457270 MT-ND3P03897 115 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms