RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ZNF365Q70YC5 407 aa13.08□□□□□ -0.31
LINC00959-201ENST00000456581 BRSK2Q8IWQ3 736 aa13.08□□□□□ -0.31
LINC00959-201ENST00000456581 ERP27Q96DN0 273 aa13.08□□□□□ -0.31
LINC00959-201ENST00000456581 PITPNM3Q9BZ71 974 aa13.08□□□□□ -0.31
LINC00959-201ENST00000456581 ROPN1BQ9BZX4 212 aaPredicted RBP13.08□□□□□ -0.31
LINC00959-201ENST00000456581 SMARCAD1Q9H4L7 1026 aa13.08□□□□□ -0.31
LINC00959-201ENST00000456581 ROPN1Q9HAT0 212 aaPredicted RBP13.08□□□□□ -0.31
LINC00959-201ENST00000456581 ALG13Q9NP73 1137 aaKnown RBP13.08□□□□□ -0.31
LINC00959-201ENST00000456581 PRKAG3Q9UGI9 489 aa13.08□□□□□ -0.31
LINC00959-201ENST00000456581 DNPEPQ9ULA0 475 aa13.08□□□□□ -0.31
LINC00959-201ENST00000456581 PLXNA1Q9UIW2 1896 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 SNAI1O95863 264 aaPredicted RBP13.08□□□□□ -0.32
LINC00959-201ENST00000456581 CXCL8P10145 99 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 NRLP54845 237 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 ORC1Q13415 861 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 CDCA2Q69YH5 1023 aaPredicted RBP13.08□□□□□ -0.32
LINC00959-201ENST00000456581 ANKMY2Q8IV38 441 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 TTC8Q8TAM2 541 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 SPDL1Q96EA4 605 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 CPB2Q96IY4 423 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 MPHOSPH6Q99547 160 aaKnown RBP13.08□□□□□ -0.32
LINC00959-201ENST00000456581 KLF6Q99612 283 aaPredicted RBP13.08□□□□□ -0.32
LINC00959-201ENST00000456581 TRAIPQ9BWF2 469 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 KCNG1Q9UIX4 513 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 A0A087WZ62 844 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 ENO4A6NNW6 628 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 C22orf31O95567 290 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 GAS8O95995 478 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 LDHAP00338 332 aaKnown RBP13.08□□□□□ -0.32
LINC00959-201ENST00000456581 GBP1P32455 592 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 RPA3P35244 121 aaPredicted RBP13.08□□□□□ -0.32
LINC00959-201ENST00000456581 KLF1Q13351 362 aaPredicted RBP13.08□□□□□ -0.32
LINC00959-201ENST00000456581 MXD4Q14582 209 aaPredicted RBP13.08□□□□□ -0.32
LINC00959-201ENST00000456581 CLUL1Q15846 466 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 PRAMEF19Q5SWL8 479 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 ZPBP2Q6X784 338 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 ZBTB8OSQ8IWT0 167 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 RBBP8NLQ8NC74 664 aaPredicted RBP13.08□□□□□ -0.32
LINC00959-201ENST00000456581 MAGEC3Q8TD91 643 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 LENG1Q96BZ8 264 aaPredicted RBP13.08□□□□□ -0.32
LINC00959-201ENST00000456581 FDXACB1Q9BRP7 624 aaPredicted RBP13.08□□□□□ -0.32
LINC00959-201ENST00000456581 IFT122Q9HBG6 1241 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 NEU2Q9Y3R4 380 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 PCDHB2Q9Y5E7 798 aa13.08□□□□□ -0.32
LINC00959-201ENST00000456581 GOLGA8RI6L899 631 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 GPR25O00155 361 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 GNA15P30679 374 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 MAGEA4P43358 317 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 NSFP46459 744 aaKnown RBP13.07□□□□□ -0.32
LINC00959-201ENST00000456581 EFNA5P52803 228 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 ATF7IP2Q5U623 682 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 ASRGL1Q7L266 308 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 ATL2Q8NHH9 583 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 MICAL1Q8TDZ2 1067 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 MORC4Q8TE76 937 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 PRR11Q96HE9 360 aaPredicted RBP13.07□□□□□ -0.32
LINC00959-201ENST00000456581 OSBPL8Q9BZF1 889 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 RXFP1Q9HBX9 757 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 ARHGEF3Q9NR81 526 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 RNF19AQ9NV58 838 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.07□□□□□ -0.32
LINC00959-201ENST00000456581 SLC5A4Q9NY91 659 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 NKIRAS1Q9NYS0 192 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 GINS2Q9Y248 185 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 CHKBQ9Y259 395 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 EXOC1LA0A1B0GW35 172 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 IQCA1LA6NCM1 817 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 ASB14A6NK59 587 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 OGTO15294 1046 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 HOXC6P09630 235 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 PECAM1P16284 738 aaPredicted RBP13.07□□□□□ -0.32
LINC00959-201ENST00000456581 DYNLT1P63172 113 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 MBTD1Q05BQ5 628 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 TMEM62Q0P6H9 643 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 ERAP1Q9NZ08 941 aa13.07□□□□□ -0.32
LINC00959-201ENST00000456581 CPSF3Q9UKF6 684 aaKnown RBP13.07□□□□□ -0.32
LINC00959-201ENST00000456581 CFAP73A6NFT4 308 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 C2orf71A6NGG8 1288 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 HBP1O60381 514 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 ZC3H11AO75152 810 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC00959-201ENST00000456581 CELF2O95319 508 aaKnown RBP13.06□□□□□ -0.32
LINC00959-201ENST00000456581 IFNB1P01574 187 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 BRD2P25440 801 aaKnown RBP13.06□□□□□ -0.32
LINC00959-201ENST00000456581 RAP1GAPP47736 663 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 OVGP1Q12889 678 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 SLC1A5Q15758 541 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 ANKRD20A2Q5SQ80 823 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 ANKRD20A1Q5TYW2 823 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 ANKRD20A3Q5VUR7 823 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC00959-201ENST00000456581 DPP9Q86TI2 863 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 KATNBL1Q9H079 304 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 CDT1Q9H211 546 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 PTPRHQ9HD43 1115 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 KLHL14Q9P2G3 628 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 NXF1Q9UBU9 619 aaKnown RBP13.06□□□□□ -0.32
LINC00959-201ENST00000456581 POLIQ9UNA4 740 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 AKT3Q9Y243 479 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 IVNS1ABPQ9Y6Y0 642 aa13.06□□□□□ -0.32
LINC00959-201ENST00000456581 TRIP11Q15643 1979 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms