RNA–Protein interactions for RNA: ENST00000455580.5

PPP1CB-208, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 3

Gene PPP1CB, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-208ENST00000455580 MYL6P60660 151 aa25.69■■□□□ 1.7
PPP1CB-208ENST00000455580 CLDN10P78369 228 aa25.69■■□□□ 1.7
PPP1CB-208ENST00000455580 TRPC3Q13507 836 aa25.69■■□□□ 1.7
PPP1CB-208ENST00000455580 WDR72Q3MJ13 1102 aa25.69■■□□□ 1.7
PPP1CB-208ENST00000455580 KRBA2Q6ZNG9 492 aa25.69■■□□□ 1.7
PPP1CB-208ENST00000455580 C4orf50Q6ZRC1 276 aa25.69■■□□□ 1.7
PPP1CB-208ENST00000455580 ASCL5Q7RTU5 278 aa25.69■■□□□ 1.7
PPP1CB-208ENST00000455580 MAML2Q8IZL2 1156 aaPredicted RBP25.69■■□□□ 1.7
PPP1CB-208ENST00000455580 STKLD1Q8NE28 680 aa25.69■■□□□ 1.7
PPP1CB-208ENST00000455580 MRPL45Q9BRJ2 306 aaKnown RBP25.69■■□□□ 1.7
PPP1CB-208ENST00000455580 GOLPH3LQ9H4A5 285 aa25.69■■□□□ 1.7
PPP1CB-208ENST00000455580 CRTAC1Q9NQ79 661 aa25.69■■□□□ 1.7
PPP1CB-208ENST00000455580 MAGEC2Q9UBF1 373 aaPredicted RBP25.69■■□□□ 1.7
PPP1CB-208ENST00000455580 MAGED2Q9UNF1 606 aaPredicted RBP25.69■■□□□ 1.7
PPP1CB-208ENST00000455580 PIAS3Q9Y6X2 628 aa25.69■■□□□ 1.7
PPP1CB-208ENST00000455580 SLC38A8A6NNN8 435 aa25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 SOBPA7XYQ1 873 aa25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 NOL4O94818 638 aa25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 RHOBTB3O94955 611 aa25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 PRAMEF12O95522 483 aa25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 SP9P0CG40 484 aa25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 DDX6P26196 483 aaKnown RBP eCLIP25.68■■□□□ 1.75e-37■■■□□ 17.4
PPP1CB-208ENST00000455580 ATICP31939 592 aa25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 GNL1P36915 607 aaPredicted RBP25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 AP3M2P53677 418 aa25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 PSMC1P62191 440 aaKnown RBP25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 DPYDQ12882 1025 aa25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 MAPRE1Q15691 268 aaKnown RBP25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 CMTM8Q8IZV2 173 aa25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 CSGALNACT1Q8TDX6 532 aa25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 FAM3CQ92520 227 aa25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 NKD2Q969F2 451 aaPredicted RBP25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 MYRFLQ96LU7 910 aa25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 XYLT2Q9H1B5 865 aa25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 GDPD2Q9HCC8 539 aa25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 UXTQ9UBK9 157 aaPredicted RBP25.68■■□□□ 1.7
PPP1CB-208ENST00000455580 PRR23AA6NEV1 266 aa25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 LRRIQ3A6PVS8 624 aaPredicted RBP25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 ZNF202O95125 648 aa25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 C4BPAP04003 597 aaKnown RBP25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 BECN1Q14457 450 aa25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 ARHGAP29Q52LW3 1261 aa25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 CELF5Q8N6W0 485 aaKnown RBP25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 MAB21L3Q8N8X9 362 aa25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 BPIFB1Q8TDL5 484 aa25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 MYLPFQ96A32 169 aa25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 CCDC47Q96A33 483 aaKnown RBP25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 SYAP1Q96A49 352 aaPredicted RBP25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 TRMT2BQ96GJ1 504 aaKnown RBP25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 SNX25Q9H3E2 840 aa25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 SPATA6Q9NWH7 488 aaPredicted RBP25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 TRAF3IP3Q9Y228 551 aa25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 NME7Q9Y5B8 376 aa25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 DMDP11532 3685 aa25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 MIA3Q5JRA6 1907 aa25.67■■□□□ 1.7
PPP1CB-208ENST00000455580 PHACTR2O75167 634 aa25.66■■□□□ 1.7
PPP1CB-208ENST00000455580 KIF20AO95235 890 aa25.66■■□□□ 1.7
PPP1CB-208ENST00000455580 NR3C1P04150 777 aa25.66■■□□□ 1.7
PPP1CB-208ENST00000455580 TNNC1P63316 161 aa25.66■■□□□ 1.7
PPP1CB-208ENST00000455580 TDRD10Q5VZ19 366 aaKnown RBP25.66■■□□□ 1.7
PPP1CB-208ENST00000455580 TXNDC8Q6A555 127 aa25.66■■□□□ 1.7
PPP1CB-208ENST00000455580 MON1AQ86VX9 555 aa25.66■■□□□ 1.7
PPP1CB-208ENST00000455580 SCN4BQ8IWT1 228 aa25.66■■□□□ 1.7
PPP1CB-208ENST00000455580 OR6B3Q8NGW1 331 aa25.66■■□□□ 1.7
PPP1CB-208ENST00000455580 MYCBPAPQ8TBZ2 947 aa25.66■■□□□ 1.7
PPP1CB-208ENST00000455580 SMG9Q9H0W8 520 aaKnown RBP25.66■■□□□ 1.7
PPP1CB-208ENST00000455580 VRTNQ9H8Y1 702 aa25.66■■□□□ 1.7
PPP1CB-208ENST00000455580 NDRG2Q9UN36 371 aaKnown RBP25.66■■□□□ 1.7
PPP1CB-208ENST00000455580 COL4A2P08572 1712 aa25.66■■□□□ 1.7
PPP1CB-208ENST00000455580 VSTM1Q6UX27 236 aa25.65■■□□□ 1.7
PPP1CB-208ENST00000455580 MRPS31Q92665 395 aaKnown RBP25.65■■□□□ 1.7
PPP1CB-208ENST00000455580 MSANTD3Q96H12 275 aa25.65■■□□□ 1.7
PPP1CB-208ENST00000455580 ZFYVE19Q96K21 471 aa25.65■■□□□ 1.7
PPP1CB-208ENST00000455580 C8orf33Q9H7E9 229 aaPredicted RBP25.65■■□□□ 1.7
PPP1CB-208ENST00000455580 NXF1Q9UBU9 619 aaKnown RBP25.65■■□□□ 1.7
PPP1CB-208ENST00000455580 FBXO4Q9UKT5 387 aa25.65■■□□□ 1.7
PPP1CB-208ENST00000455580 CACNA1IQ9P0X4 2223 aa25.65■■□□□ 1.7
PPP1CB-208ENST00000455580 ZFHX2Q9C0A1 2572 aaPredicted RBP25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 LAMTOR5O43504 91 aa25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 CALUO43852 315 aaPredicted RBP25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 BDNFP23560 247 aa25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 CCNE1P24864 410 aa25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 AVPR1AP37288 418 aa25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 PLCB2Q00722 1185 aa25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 CYP27A1Q02318 531 aa25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 BIRC3Q13489 604 aa25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 KCNB1Q14721 858 aa25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 TMC2Q8TDI7 906 aa25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 PCED1BQ96HM7 432 aa25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 SPATA17Q96L03 361 aa25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 CEP295NLQ96MC4 621 aa25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 SEMA4AQ9H3S1 761 aa25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 THG1LQ9NWX6 298 aaKnown RBP25.64■■□□□ 1.7
PPP1CB-208ENST00000455580 F5P12259 2224 aa25.64■■□□□ 1.69
PPP1CB-208ENST00000455580 NUP210Q8TEM1 1887 aaPredicted RBP25.64■■□□□ 1.69
PPP1CB-208ENST00000455580 TICRRQ7Z2Z1 1910 aa25.63■■□□□ 1.69
PPP1CB-208ENST00000455580 TADA3O75528 432 aa25.63■■□□□ 1.69
PPP1CB-208ENST00000455580 PTPN1P18031 435 aaKnown RBP25.63■■□□□ 1.69
PPP1CB-208ENST00000455580 KPNA1P52294 538 aaPredicted RBP25.63■■□□□ 1.69
PPP1CB-208ENST00000455580 DLG4P78352 724 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms