RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 TMEM30AQ9NV96 361 aa17.23■□□□□ 0.35
GPC1-206ENST00000455111 HSPBP1Q9NZL4 362 aa17.23■□□□□ 0.35
GPC1-206ENST00000455111 MAGED2Q9UNF1 606 aaPredicted RBP17.23■□□□□ 0.35
GPC1-206ENST00000455111 TULP1O00294 542 aaPredicted RBP17.22■□□□□ 0.35
GPC1-206ENST00000455111 DPYSL4O14531 572 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 PPP6R2O75170 966 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 KRT19P08727 400 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 CACNA2D1P54289 1103 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 USP46P62068 366 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 PSMC1P62191 440 aaKnown RBP17.22■□□□□ 0.35
GPC1-206ENST00000455111 RBP5P82980 135 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 ALCAMQ13740 583 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 RUNX3Q13761 415 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 PKP1Q13835 747 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 STK38Q15208 465 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 FOXD4L5Q5VV16 416 aaPredicted RBP17.22■□□□□ 0.35
GPC1-206ENST00000455111 CNNM4Q6P4Q7 775 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 MON1AQ86VX9 555 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 ADGRF2Q8IZF7 708 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 SCFD1Q8WVM8 642 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 FOXD4L4Q8WXT5 416 aaPredicted RBP17.22■□□□□ 0.35
GPC1-206ENST00000455111 ZNF516Q92618 1163 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 DHX58Q96C10 678 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 TMEM206Q9H813 350 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 ABCB6Q9NP58 842 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 GCNT4Q9P109 453 aa17.22■□□□□ 0.35
GPC1-206ENST00000455111 C2orf78A6NCI8 922 aa17.21■□□□□ 0.35
GPC1-206ENST00000455111 HUS1O60921 280 aa17.21■□□□□ 0.35
GPC1-206ENST00000455111 TSPY1Q01534 308 aa17.21■□□□□ 0.35
GPC1-206ENST00000455111 ZNF77Q15935 545 aa17.21■□□□□ 0.35
GPC1-206ENST00000455111 NFE2Q16621 373 aaPredicted RBP17.21■□□□□ 0.35
GPC1-206ENST00000455111 ITPRIPL2Q3MIP1 535 aa17.21■□□□□ 0.35
GPC1-206ENST00000455111 CFAP221Q4G0U5 840 aa17.21■□□□□ 0.35
GPC1-206ENST00000455111 TMEM196Q5HYL7 178 aa17.21■□□□□ 0.35
GPC1-206ENST00000455111 CCDC65Q8IXS2 484 aa17.21■□□□□ 0.35
GPC1-206ENST00000455111 TMEM86AQ8N2M4 240 aa17.21■□□□□ 0.35
GPC1-206ENST00000455111 CACTINQ8WUQ7 758 aaKnown RBP17.21■□□□□ 0.35
GPC1-206ENST00000455111 MYLPFQ96A32 169 aa17.21■□□□□ 0.35
GPC1-206ENST00000455111 TRMT2BQ96GJ1 504 aaKnown RBP17.21■□□□□ 0.35
GPC1-206ENST00000455111 MRPL45Q9BRJ2 306 aaKnown RBP17.21■□□□□ 0.35
GPC1-206ENST00000455111 AGPAT3Q9NRZ7 376 aa17.21■□□□□ 0.35
GPC1-206ENST00000455111 TDP1Q9NUW8 608 aa17.21■□□□□ 0.35
GPC1-206ENST00000455111 RALGAPA1Q6GYQ0 2036 aa17.21■□□□□ 0.35
GPC1-206ENST00000455111 CLIC2O15247 247 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 EGFP01133 1207 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 TMEM191BP0C7N4 346 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 CSH1P0DML2 217 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 CSH2P0DML3 217 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 ATXN1P54253 815 aaKnown RBP17.2■□□□□ 0.34
GPC1-206ENST00000455111 PLCB2Q00722 1185 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 SPEM2Q0P670 501 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 USP4Q13107 963 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 LRRC32Q14392 662 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 PUM1Q14671 1186 aaKnown RBP eCLIP17.2■□□□□ 0.34
GPC1-206ENST00000455111 DGKKQ5KSL6 1271 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 HEATR6Q6AI08 1181 aaKnown RBP17.2■□□□□ 0.34
GPC1-206ENST00000455111 DGLUCYQ7Z3D6 616 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 GRAMD1CQ8IYS0 662 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 RDH13Q8NBN7 331 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 ELMO3Q96BJ8 720 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 HPDLQ96IR7 371 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 C7orf25Q9BPX7 421 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 SYT15Q9BQS2 421 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 BLZF1Q9H2G9 400 aa17.2■□□□□ 0.34
GPC1-206ENST00000455111 TRDMT1O14717 391 aaKnown RBP17.19■□□□□ 0.34
GPC1-206ENST00000455111 CUTAO60888 179 aa17.19■□□□□ 0.34
GPC1-206ENST00000455111 YEATS4O95619 227 aa17.19■□□□□ 0.34
GPC1-206ENST00000455111 PXNP49023 591 aaPredicted RBP17.19■□□□□ 0.34
GPC1-206ENST00000455111 MYL7Q01449 175 aa17.19■□□□□ 0.34
GPC1-206ENST00000455111 ZNF268Q14587 947 aaPredicted RBP17.19■□□□□ 0.34
GPC1-206ENST00000455111 GAB4Q2WGN9 574 aa17.19■□□□□ 0.34
GPC1-206ENST00000455111 FOXD4L6Q3SYB3 417 aaPredicted RBP17.19■□□□□ 0.34
GPC1-206ENST00000455111 FOXD4L3Q6VB84 417 aaPredicted RBP17.19■□□□□ 0.34
GPC1-206ENST00000455111 TRAPPC11Q7Z392 1133 aa17.19■□□□□ 0.34
GPC1-206ENST00000455111 LONP2Q86WA8 852 aa17.19■□□□□ 0.34
GPC1-206ENST00000455111 SPATA18Q8TC71 538 aa17.19■□□□□ 0.34
GPC1-206ENST00000455111 CHAMP1Q96JM3 812 aa17.19■□□□□ 0.34
GPC1-206ENST00000455111 GCNAQ96QF7 691 aa17.19■□□□□ 0.34
GPC1-206ENST00000455111 DPEP3Q9H4B8 488 aa17.19■□□□□ 0.34
GPC1-206ENST00000455111 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.19■□□□□ 0.34
GPC1-206ENST00000455111 ZNF233A6NK53 670 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 EIF3DO15371 548 aaKnown RBP eCLIP17.18■□□□□ 0.34
GPC1-206ENST00000455111 KLRC4O43908 158 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 PDGFRBP09619 1106 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 WARSP23381 471 aaKnown RBP17.18■□□□□ 0.34
GPC1-206ENST00000455111 DDX6P26196 483 aaKnown RBP eCLIP17.18■□□□□ 0.34
GPC1-206ENST00000455111 GJA4P35212 333 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 AVPR1AP37288 418 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 MAGEA11P43364 429 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 LHX1P48742 406 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 CASP4P49662 377 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 GALK1P51570 392 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 NRLP54845 237 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 ASIC1P78348 528 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 CUL4BQ13620 913 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 TAF12Q16514 161 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 FAM26FQ5R3K3 315 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 C1orf228Q6PIY5 440 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 WDR49Q8IV35 697 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 SCN4BQ8IWT1 228 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms