RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 FCARP24071 287 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 CYP2F1P24903 491 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 LMO2P25791 158 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 GABRR2P28476 465 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 VIPR2P41587 438 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 EPHA5P54756 1037 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 PSMC1P62191 440 aaKnown RBP10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 TNNC1P63316 161 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 CYP4F8P98187 520 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 FAM160A1Q05DH4 1040 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 SMARCB1Q12824 385 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 GRM2Q14416 872 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 VEPH1Q14D04 833 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 TAF12Q16514 161 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 DDR2Q16832 855 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 WDR72Q3MJ13 1102 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 STXBP5Q5T5C0 1151 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 SDHAF4Q5VUM1 108 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 TDRD10Q5VZ19 366 aaKnown RBP10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 CWF19L1Q69YN2 538 aaKnown RBP10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 DPH6Q7L8W6 267 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 ITIH5Q86UX2 942 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 SPATA2LQ8IUW3 424 aaPredicted RBP10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 GUF1Q8N442 669 aaKnown RBP10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 PRSS33Q8NF86 280 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 ZSCAN18Q8TBC5 510 aaPredicted RBP10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 PKMYT1Q99640 499 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 MRPL45Q9BRJ2 306 aaKnown RBP10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 SNX25Q9H3E2 840 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 ATXN3LQ9H3M9 355 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 SLC2A4RGQ9NR83 387 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 NXF1Q9UBU9 619 aaKnown RBP10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 MAGED2Q9UNF1 606 aaPredicted RBP10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 TRAF3IP3Q9Y228 551 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 FRMD4BQ9Y2L6 1034 aa10.13□□□□□ -0.79
CDC42EP3-203ENST00000453555 MYBPHLA2RUH7 354 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 GADD45BO75293 160 aaPredicted RBP10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 VNN1O95497 513 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 C4BPAP04003 597 aaKnown RBP10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 WARSP23381 471 aaKnown RBP10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 NR2F2P24468 414 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 PCSK1P29120 753 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 GNL1P36915 607 aaPredicted RBP10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 PLA2G5P39877 138 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 NFE2Q16621 373 aaPredicted RBP10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 ISM2Q6H9L7 571 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 GAREM2Q75VX8 874 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 LIMS2Q7Z4I7 341 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 SCN4BQ8IWT1 228 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 OR6B3Q8NGW1 331 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 SPATA18Q8TC71 538 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 SMARCD2Q92925 531 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 SYAP1Q96A49 352 aaPredicted RBP10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 ELSPBP1Q96BH3 223 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 ASB16Q96NS5 453 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 SYT15Q9BQS2 421 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 ZFP14Q9HCL3 533 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 NME7Q9Y5B8 376 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 COL4A2P08572 1712 aa10.12□□□□□ -0.79
CDC42EP3-203ENST00000453555 AKAP3O75969 853 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 SMC2O95347 1197 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 ATICP31939 592 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 PRCPP42785 496 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 RAP1GAPP47736 663 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 CLCN5P51795 746 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 VAMP7P51809 220 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 AP3M2P53677 418 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 CDH8P55286 799 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 CLDN10P78369 228 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 PLCB2Q00722 1185 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 CYP27A1Q02318 531 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 KCNC4Q03721 635 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 ADAM9Q13443 819 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 NCOA4Q13772 614 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 ZNF699Q32M78 642 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 SLC44A4Q53GD3 710 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 ARHGAP15Q53QZ3 475 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 MDH1BQ5I0G3 518 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 GPR158Q5T848 1215 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 FAM171BQ6P995 826 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 VITQ6UXI7 678 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 SCARA5Q6ZMJ2 495 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 TMEM174Q8WUU8 243 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 SMARCE1Q969G3 411 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 MYLPFQ96A32 169 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 EEF2KMTQ96G04 330 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 GSDMAQ96QA5 445 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 GCNAQ96QF7 691 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 GPR88Q9GZN0 384 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 XYLT2Q9H1B5 865 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 KCNH6Q9H252 994 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 DPEP3Q9H4B8 488 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 MMRN2Q9H8L6 949 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 TBC1D17Q9HA65 648 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 CRTAC1Q9NQ79 661 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 ARHGEF3Q9NR81 526 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 RMND1Q9NWS8 449 aa10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 MAGEC2Q9UBF1 373 aaPredicted RBP10.11□□□□□ -0.79
CDC42EP3-203ENST00000453555 CDH9Q9ULB4 789 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms