RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 GCNAQ96QF7 691 aa32.08■■■□□ 2.73
CCDC117-206ENST00000453543 MAGED2Q9UNF1 606 aaPredicted RBP32.08■■■□□ 2.73
CCDC117-206ENST00000453543 PTPRDP23468 1912 aa32.08■■■□□ 2.73
CCDC117-206ENST00000453543 NUP210Q8TEM1 1887 aaPredicted RBP32.08■■■□□ 2.73
CCDC117-206ENST00000453543 HEPACAM2A8MVW5 462 aa32.07■■■□□ 2.72
CCDC117-206ENST00000453543 IKBKBO14920 756 aa32.07■■■□□ 2.72
CCDC117-206ENST00000453543 GALR2O43603 387 aaPredicted RBP32.07■■■□□ 2.72
CCDC117-206ENST00000453543 FAM163BP0C2L3 166 aa32.07■■■□□ 2.72
CCDC117-206ENST00000453543 CSH1P0DML2 217 aa32.07■■■□□ 2.72
CCDC117-206ENST00000453543 CSH2P0DML3 217 aa32.07■■■□□ 2.72
CCDC117-206ENST00000453543 PSMC2P35998 433 aaKnown RBP32.07■■■□□ 2.72
CCDC117-206ENST00000453543 MAGEA11P43364 429 aa32.07■■■□□ 2.72
CCDC117-206ENST00000453543 CDH8P55286 799 aa32.07■■■□□ 2.72
CCDC117-206ENST00000453543 MLF2Q15773 248 aaPredicted RBP32.07■■■□□ 2.72
CCDC117-206ENST00000453543 EDRF1Q3B7T1 1238 aa32.07■■■□□ 2.72
CCDC117-206ENST00000453543 ZNF667Q5HYK9 610 aa32.07■■■□□ 2.72
CCDC117-206ENST00000453543 MDH1BQ5I0G3 518 aa32.07■■■□□ 2.72
CCDC117-206ENST00000453543 PHLDB3Q6NSJ2 640 aa32.07■■■□□ 2.72
CCDC117-206ENST00000453543 INTS8Q75QN2 995 aaKnown RBP32.07■■■□□ 2.72
CCDC117-206ENST00000453543 ARID3BQ8IVW6 561 aaPredicted RBP32.07■■■□□ 2.72
CCDC117-206ENST00000453543 MYCBPAPQ8TBZ2 947 aa32.07■■■□□ 2.72
CCDC117-206ENST00000453543 PCED1BQ96HM7 432 aa32.07■■■□□ 2.72
CCDC117-206ENST00000453543 TRMT61BQ9BVS5 477 aaKnown RBP32.07■■■□□ 2.72
CCDC117-206ENST00000453543 FOXQ1Q9C009 403 aa32.07■■■□□ 2.72
CCDC117-206ENST00000453543 SDCBP2Q9H190 292 aa32.07■■■□□ 2.72
CCDC117-206ENST00000453543 MAGEC2Q9UBF1 373 aaPredicted RBP32.07■■■□□ 2.72
CCDC117-206ENST00000453543 HOOK1Q9UJC3 728 aaKnown RBP32.07■■■□□ 2.72
CCDC117-206ENST00000453543 DENND4CQ5VZ89 1909 aa32.06■■■□□ 2.72
CCDC117-206ENST00000453543 OBSL1O75147 1896 aa32.06■■■□□ 2.72
CCDC117-206ENST00000453543 SLC38A8A6NNN8 435 aa32.06■■■□□ 2.72
CCDC117-206ENST00000453543 PSMC3P17980 439 aa32.06■■■□□ 2.72
CCDC117-206ENST00000453543 BDNFP23560 247 aa32.06■■■□□ 2.72
CCDC117-206ENST00000453543 PTPN5P54829 565 aa32.06■■■□□ 2.72
CCDC117-206ENST00000453543 NLRP12P59046 1061 aa32.06■■■□□ 2.72
CCDC117-206ENST00000453543 STARD6P59095 220 aa32.06■■■□□ 2.72
CCDC117-206ENST00000453543 CYP27A1Q02318 531 aa32.06■■■□□ 2.72
CCDC117-206ENST00000453543 MAPRE1Q15691 268 aaKnown RBP32.06■■■□□ 2.72
CCDC117-206ENST00000453543 TASP1Q9H6P5 420 aa32.06■■■□□ 2.72
CCDC117-206ENST00000453543 BRD9Q9H8M2 597 aa32.06■■■□□ 2.72
CCDC117-206ENST00000453543 NOL4O94818 638 aa32.05■■■□□ 2.72
CCDC117-206ENST00000453543 HLA-DRAP01903 254 aa32.05■■■□□ 2.72
CCDC117-206ENST00000453543 F11P03951 625 aa32.05■■■□□ 2.72
CCDC117-206ENST00000453543 KRT13P13646 458 aa32.05■■■□□ 2.72
CCDC117-206ENST00000453543 GDI1P31150 447 aa32.05■■■□□ 2.72
CCDC117-206ENST00000453543 PIK3CAP42336 1068 aa32.05■■■□□ 2.72
CCDC117-206ENST00000453543 NUBP1P53384 320 aa32.05■■■□□ 2.72
CCDC117-206ENST00000453543 PPP3CAQ08209 521 aa32.05■■■□□ 2.72
CCDC117-206ENST00000453543 COBLL1Q53SF7 1204 aa32.05■■■□□ 2.72
CCDC117-206ENST00000453543 DEPDC1BQ8WUY9 529 aa32.05■■■□□ 2.72
CCDC117-206ENST00000453543 SHDQ96IW2 340 aa32.05■■■□□ 2.72
CCDC117-206ENST00000453543 COL4A2P08572 1712 aa32.04■■■□□ 2.72
CCDC117-206ENST00000453543 A8MXQ7 604 aa32.04■■■□□ 2.72
CCDC117-206ENST00000453543 KINO60870 393 aaKnown RBP32.04■■■□□ 2.72
CCDC117-206ENST00000453543 PTPN1P18031 435 aaKnown RBP32.04■■■□□ 2.72
CCDC117-206ENST00000453543 GCLMP48507 274 aa32.04■■■□□ 2.72
CCDC117-206ENST00000453543 PRKCQQ04759 706 aa32.04■■■□□ 2.72
CCDC117-206ENST00000453543 SGSM1Q2NKQ1 1148 aa32.04■■■□□ 2.72
CCDC117-206ENST00000453543 SPOPLQ6IQ16 392 aa32.04■■■□□ 2.72
CCDC117-206ENST00000453543 MFSD6LQ8IWD5 586 aa32.04■■■□□ 2.72
CCDC117-206ENST00000453543 SLC46A2Q9BY10 475 aa32.04■■■□□ 2.72
CCDC117-206ENST00000453543 UTP3Q9NQZ2 479 aaKnown RBP eCLIP32.04■■■□□ 2.722e-6■■■■■ 149.1
CCDC117-206ENST00000453543 HEBP1Q9NRV9 189 aa32.04■■■□□ 2.72
CCDC117-206ENST00000453543 TICRRQ7Z2Z1 1910 aa32.03■■■□□ 2.72
CCDC117-206ENST00000453543 TADA3O75528 432 aa32.03■■■□□ 2.72
CCDC117-206ENST00000453543 PRAMEF12O95522 483 aa32.03■■■□□ 2.72
CCDC117-206ENST00000453543 ASS1P00966 412 aaKnown RBP32.03■■■□□ 2.72
CCDC117-206ENST00000453543 PMS1P54277 932 aaKnown RBP32.03■■■□□ 2.72
CCDC117-206ENST00000453543 ISM2Q6H9L7 571 aa32.03■■■□□ 2.72
CCDC117-206ENST00000453543 VSTM1Q6UX27 236 aa32.03■■■□□ 2.72
CCDC117-206ENST00000453543 ELOA2Q8IYF1 753 aaPredicted RBP32.03■■■□□ 2.72
CCDC117-206ENST00000453543 DNASE1L2Q92874 299 aa32.03■■■□□ 2.72
CCDC117-206ENST00000453543 E2F7Q96AV8 911 aa32.03■■■□□ 2.72
CCDC117-206ENST00000453543 TRMT2BQ96GJ1 504 aaKnown RBP32.03■■■□□ 2.72
CCDC117-206ENST00000453543 LRRC3BQ96PB8 259 aa32.03■■■□□ 2.72
CCDC117-206ENST00000453543 DDX23Q9BUQ8 820 aaKnown RBP32.03■■■□□ 2.72
CCDC117-206ENST00000453543 MMRN2Q9H8L6 949 aa32.03■■■□□ 2.72
CCDC117-206ENST00000453543 CHMP5Q9NZZ3 219 aa32.03■■■□□ 2.72
CCDC117-206ENST00000453543 CACNA1HO95180 2353 aa32.03■■■□□ 2.72
CCDC117-206ENST00000453543 DCNP07585 359 aaKnown RBP32.02■■■□□ 2.72
CCDC117-206ENST00000453543 TPRG1Q6ZUI0 275 aa32.02■■■□□ 2.72
CCDC117-206ENST00000453543 CCDC105Q8IYK2 499 aa32.02■■■□□ 2.72
CCDC117-206ENST00000453543 ADSSL1Q8N142 457 aa32.02■■■□□ 2.72
CCDC117-206ENST00000453543 B3GALNT2Q8NCR0 500 aa32.02■■■□□ 2.72
CCDC117-206ENST00000453543 PJA1Q8NG27 643 aa32.02■■■□□ 2.72
CCDC117-206ENST00000453543 MYRFLQ96LU7 910 aa32.02■■■□□ 2.72
CCDC117-206ENST00000453543 SMG9Q9H0W8 520 aaKnown RBP32.02■■■□□ 2.72
CCDC117-206ENST00000453543 MAN1B1Q9UKM7 699 aa32.02■■■□□ 2.72
CCDC117-206ENST00000453543 SIT1Q9Y3P8 196 aa32.02■■■□□ 2.72
CCDC117-206ENST00000453543 GREB1Q4ZG55 1949 aa32.02■■■□□ 2.72
CCDC117-206ENST00000453543 CD72P21854 359 aa32.01■■■□□ 2.71
CCDC117-206ENST00000453543 GRIK1P39086 918 aa32.01■■■□□ 2.71
CCDC117-206ENST00000453543 ENPEPQ07075 957 aa32.01■■■□□ 2.71
CCDC117-206ENST00000453543 MAB21L3Q8N8X9 362 aa32.01■■■□□ 2.71
CCDC117-206ENST00000453543 TAS1R2Q8TE23 839 aa32.01■■■□□ 2.71
CCDC117-206ENST00000453543 TAF4BQ92750 862 aa32.01■■■□□ 2.71
CCDC117-206ENST00000453543 UXTQ9UBK9 157 aaPredicted RBP32.01■■■□□ 2.71
CCDC117-206ENST00000453543 KANSL1LA0AUZ9 987 aa32■■■□□ 2.71
CCDC117-206ENST00000453543 TRIM49BA6NDI0 452 aa32■■■□□ 2.71
CCDC117-206ENST00000453543 H0Y858 1186 aa32■■■□□ 2.71
CCDC117-206ENST00000453543 CLDN5O00501 218 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms