RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 SDK1Q7Z5N4 2213 aa11.71□□□□□ -0.54
USP1-204ENST00000452143 ATG2BQ96BY7 2078 aa11.71□□□□□ -0.54
USP1-204ENST00000452143 LAMA1P25391 3075 aa11.71□□□□□ -0.54
USP1-204ENST00000452143 CHD6Q8TD26 2715 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.7□□□□□ -0.54
USP1-204ENST00000452143 FRMD3A2A2Y4 597 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 DCDC2BA2VCK2 349 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 VPS37CA5D8V6 355 aaPredicted RBP11.7□□□□□ -0.54
USP1-204ENST00000452143 MYMKA6NI61 221 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 KIAA0391O15091 583 aaKnown RBP11.7□□□□□ -0.54
USP1-204ENST00000452143 HUS1O60921 280 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 PRPF40AO75400 957 aaKnown RBP11.7□□□□□ -0.54
USP1-204ENST00000452143 AKAP3O75969 853 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 DRD1P21728 446 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 FAM160A1Q05DH4 1040 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 KCNA1Q09470 495 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 FBXO43Q4G163 708 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 INTS6LQ5JSJ4 861 aaKnown RBP11.7□□□□□ -0.54
USP1-204ENST00000452143 RRAGBQ5VZM2 374 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 CC2D1AQ6P1N0 951 aaPredicted RBP11.7□□□□□ -0.54
USP1-204ENST00000452143 CCDC73Q6ZRK6 1079 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 USP49Q70CQ1 688 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 SV2BQ7L1I2 683 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 CAMKK1Q8N5S9 505 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 TOP6BLQ8N6T0 577 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 CHFRQ96EP1 664 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 SAAL1Q96ER3 474 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 FUBP3Q96I24 572 aaKnown RBP eCLIP11.7□□□□□ -0.54
USP1-204ENST00000452143 CNTNAP3BQ96NU0 1288 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 PKMYT1Q99640 499 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 PI4K2AQ9BTU6 479 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 CNTNAP3Q9BZ76 1288 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 IKZF4Q9H2S9 585 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 EBF3Q9H4W6 596 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 TMEM206Q9H813 350 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 TMLHEQ9NVH6 421 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 DDX43Q9NXZ2 648 aaKnown RBP11.7□□□□□ -0.54
USP1-204ENST00000452143 L1RE1Q9UN81 338 aa11.7□□□□□ -0.54
USP1-204ENST00000452143 EXTL3O43909 919 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 TADA3O75528 432 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 RPP40O75818 363 aaKnown RBP11.69□□□□□ -0.54
USP1-204ENST00000452143 PCSK1P29120 753 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 LHX1P48742 406 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 LIMK1P53667 647 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 WNT7BP56706 349 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 USP4Q13107 963 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 CUL4AQ13619 759 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 MTF1Q14872 753 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 PPM1JQ5JR12 505 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 TXNDC8Q6A555 127 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 TRIM68Q6AZZ1 485 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 FSTL4Q6MZW2 842 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 PKN3Q6P5Z2 889 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 DPH6Q7L8W6 267 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 CACNA2D4Q7Z3S7 1137 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 ADGRF2Q8IZF7 708 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 CPA6Q8N4T0 437 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 FSIP1Q8NA03 581 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 CXorf38Q8TB03 319 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 ATP2A3Q93084 1043 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 CEP295NLQ96MC4 621 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 MAGED2Q9UNF1 606 aaPredicted RBP11.69□□□□□ -0.54
USP1-204ENST00000452143 AGAP1Q9UPQ3 857 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 SLC8A2Q9UPR5 921 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 CLIC4Q9Y696 253 aa11.69□□□□□ -0.54
USP1-204ENST00000452143 TRAV19A0A0A6YYK7 116 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 OTOL1A6NHN0 477 aaPredicted RBP11.68□□□□□ -0.54
USP1-204ENST00000452143 GABRDO14764 452 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 RNF40O75150 1001 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 EPN2O95208 641 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 CKMP06732 381 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 USP17L7P0C7H9 530 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 TMEM191BP0C7N4 346 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 CCDC192P0DO97 292 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 IDEP14735 1019 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 CYP2F1P24903 491 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 STAT6P42226 847 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 RAP1GAPP47736 663 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 GPR15P49685 360 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 PDE6CP51160 858 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 CDR1P51861 262 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 CASP5P51878 434 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 RBP5P82980 135 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 MYO1EQ12965 1108 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 MAPRE1Q15691 268 aaKnown RBP11.68□□□□□ -0.54
USP1-204ENST00000452143 ZNF77Q15935 545 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 DDR2Q16832 855 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 C4orf50Q6ZRC1 276 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 STXBP4Q6ZWJ1 553 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 SPATA2LQ8IUW3 424 aaPredicted RBP11.68□□□□□ -0.54
USP1-204ENST00000452143 SYCP3Q8IZU3 236 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 GPD1LQ8N335 351 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 C12orf50Q8NA57 414 aaPredicted RBP11.68□□□□□ -0.54
USP1-204ENST00000452143 RIN3Q8TB24 985 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 OSCP1Q8WVF1 389 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 ACDQ96AP0 544 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 ZC3H10Q96K80 434 aaKnown RBP11.68□□□□□ -0.54
USP1-204ENST00000452143 P2RY13Q9BPV8 354 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 CBWD1Q9BRT8 395 aa11.68□□□□□ -0.54
USP1-204ENST00000452143 MTMR12Q9C0I1 747 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms