RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 ZFHX2Q9C0A1 2572 aaPredicted RBP23.16■■□□□ 1.3
C9orf3-208ENST00000451893 PVALEFA0A1B0GWK0 134 aa23.16■■□□□ 1.3
C9orf3-208ENST00000451893 SLC38A8A6NNN8 435 aa23.16■■□□□ 1.3
C9orf3-208ENST00000451893 PHACTR2O75167 634 aa23.16■■□□□ 1.3
C9orf3-208ENST00000451893 MYL1P05976 194 aa23.16■■□□□ 1.3
C9orf3-208ENST00000451893 CCNE1P24864 410 aa23.16■■□□□ 1.3
C9orf3-208ENST00000451893 RPS9P46781 194 aaKnown RBP23.16■■□□□ 1.3
C9orf3-208ENST00000451893 C4orf50Q6ZRC1 276 aa23.16■■□□□ 1.3
C9orf3-208ENST00000451893 OR5B17Q8NGF7 314 aa23.16■■□□□ 1.3
C9orf3-208ENST00000451893 BPIFB1Q8TDL5 484 aa23.16■■□□□ 1.3
C9orf3-208ENST00000451893 C8orf33Q9H7E9 229 aaPredicted RBP23.16■■□□□ 1.3
C9orf3-208ENST00000451893 TMLHEQ9NVH6 421 aa23.16■■□□□ 1.3
C9orf3-208ENST00000451893 ANO10Q9NW15 660 aa23.16■■□□□ 1.3
C9orf3-208ENST00000451893 OBP2AQ9NY56 170 aa23.16■■□□□ 1.3
C9orf3-208ENST00000451893 CGNQ9P2M7 1197 aaKnown RBP23.16■■□□□ 1.3
C9orf3-208ENST00000451893 SIX4Q9UIU6 781 aa23.16■■□□□ 1.3
C9orf3-208ENST00000451893 EXOC3O60645 756 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 SMC2O95347 1197 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 DDX6P26196 483 aaKnown RBP eCLIP23.15■■□□□ 1.3
C9orf3-208ENST00000451893 GPR15P49685 360 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 TNNC1P63316 161 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 PLCB2Q00722 1185 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 CUL4BQ13620 913 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 LRRC32Q14392 662 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 DDR2Q16832 855 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 EPM2AIP1Q7L775 607 aaPredicted RBP23.15■■□□□ 1.3
C9orf3-208ENST00000451893 DPH6Q7L8W6 267 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 CELF5Q8N6W0 485 aaKnown RBP23.15■■□□□ 1.3
C9orf3-208ENST00000451893 MAB21L3Q8N8X9 362 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 TTC16Q8NEE8 873 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 TTC8Q8TAM2 541 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 GOLGA5Q8TBA6 731 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 SCFD1Q8WVM8 642 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 CCDC47Q96A33 483 aaKnown RBP23.15■■□□□ 1.3
C9orf3-208ENST00000451893 CGRRF1Q99675 332 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 SYT15Q9BQS2 421 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 SNX25Q9H3E2 840 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 GRPEL1Q9HAV7 217 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 ABCB6Q9NP58 842 aa23.15■■□□□ 1.3
C9orf3-208ENST00000451893 PTPRZ1P23471 2315 aaPredicted RBP23.14■■□□□ 1.3
C9orf3-208ENST00000451893 CYP2F1P24903 491 aa23.14■■□□□ 1.29
C9orf3-208ENST00000451893 ANXA13P27216 316 aa23.14■■□□□ 1.29
C9orf3-208ENST00000451893 FCHO2Q0JRZ9 810 aa23.14■■□□□ 1.29
C9orf3-208ENST00000451893 MAPRE1Q15691 268 aaKnown RBP23.14■■□□□ 1.29
C9orf3-208ENST00000451893 STX1AQ16623 288 aa23.14■■□□□ 1.29
C9orf3-208ENST00000451893 ZNF528Q3MIS6 628 aa23.14■■□□□ 1.29
C9orf3-208ENST00000451893 SDHAF4Q5VUM1 108 aa23.14■■□□□ 1.29
C9orf3-208ENST00000451893 CC2D1AQ6P1N0 951 aaPredicted RBP23.14■■□□□ 1.29
C9orf3-208ENST00000451893 TRAPPC11Q7Z392 1133 aa23.14■■□□□ 1.29
C9orf3-208ENST00000451893 GRAMD1CQ8IYS0 662 aa23.14■■□□□ 1.29
C9orf3-208ENST00000451893 CLDN23Q96B33 292 aa23.14■■□□□ 1.29
C9orf3-208ENST00000451893 ZFYVE19Q96K21 471 aa23.14■■□□□ 1.29
C9orf3-208ENST00000451893 SMG9Q9H0W8 520 aaKnown RBP23.14■■□□□ 1.29
C9orf3-208ENST00000451893 LMAN1LQ9HAT1 526 aa23.14■■□□□ 1.29
C9orf3-208ENST00000451893 TRPC7Q9HCX4 862 aa23.14■■□□□ 1.29
C9orf3-208ENST00000451893 MAGEC2Q9UBF1 373 aaPredicted RBP23.14■■□□□ 1.29
C9orf3-208ENST00000451893 CDH9Q9ULB4 789 aa23.14■■□□□ 1.29
C9orf3-208ENST00000451893 PTPRJQ12913 1337 aa23.13■■□□□ 1.29
C9orf3-208ENST00000451893 NLRP12P59046 1061 aa23.13■■□□□ 1.29
C9orf3-208ENST00000451893 PSMC1P62191 440 aaKnown RBP23.13■■□□□ 1.29
C9orf3-208ENST00000451893 CYP27A1Q02318 531 aa23.13■■□□□ 1.29
C9orf3-208ENST00000451893 CYP24A1Q07973 514 aa23.13■■□□□ 1.29
C9orf3-208ENST00000451893 BIRC3Q13489 604 aa23.13■■□□□ 1.29
C9orf3-208ENST00000451893 PSMD6Q15008 389 aa23.13■■□□□ 1.29
C9orf3-208ENST00000451893 KNOP1Q1ED39 458 aaKnown RBP23.13■■□□□ 1.29
C9orf3-208ENST00000451893 SOWAHAQ2M3V2 549 aa23.13■■□□□ 1.29
C9orf3-208ENST00000451893 OSTM1Q86WC4 334 aa23.13■■□□□ 1.29
C9orf3-208ENST00000451893 CMTM8Q8IZV2 173 aa23.13■■□□□ 1.29
C9orf3-208ENST00000451893 TRIML1Q8N9V2 468 aa23.13■■□□□ 1.29
C9orf3-208ENST00000451893 STKLD1Q8NE28 680 aa23.13■■□□□ 1.29
C9orf3-208ENST00000451893 RSPRY1Q96DX4 576 aa23.13■■□□□ 1.29
C9orf3-208ENST00000451893 PAGE5Q96GU1 130 aa23.13■■□□□ 1.29
C9orf3-208ENST00000451893 IER2Q9BTL4 223 aa23.13■■□□□ 1.29
C9orf3-208ENST00000451893 DENND4CQ5VZ89 1909 aa23.13■■□□□ 1.29
C9orf3-208ENST00000451893 NCANO14594 1321 aa23.12■■□□□ 1.29
C9orf3-208ENST00000451893 TGFB1I1O43294 461 aa23.12■■□□□ 1.29
C9orf3-208ENST00000451893 PRAMEF12O95522 483 aa23.12■■□□□ 1.29
C9orf3-208ENST00000451893 PDGFRBP09619 1106 aa23.12■■□□□ 1.29
C9orf3-208ENST00000451893 HOXD13P35453 343 aa23.12■■□□□ 1.29
C9orf3-208ENST00000451893 MTAPQ13126 283 aa23.12■■□□□ 1.29
C9orf3-208ENST00000451893 OR6B3Q8NGW1 331 aa23.12■■□□□ 1.29
C9orf3-208ENST00000451893 FUBP3Q96I24 572 aaKnown RBP eCLIP23.12■■□□□ 1.29
C9orf3-208ENST00000451893 MKNK1Q9BUB5 465 aa23.12■■□□□ 1.29
C9orf3-208ENST00000451893 NAT10Q9H0A0 1025 aaKnown RBP23.12■■□□□ 1.29
C9orf3-208ENST00000451893 IL21Q9HBE4 155 aa23.12■■□□□ 1.29
C9orf3-208ENST00000451893 F5P12259 2224 aa23.12■■□□□ 1.29
C9orf3-208ENST00000451893 FANCMQ8IYD8 2048 aa23.11■■□□□ 1.29
C9orf3-208ENST00000451893 COL4A2P08572 1712 aa23.11■■□□□ 1.29
C9orf3-208ENST00000451893 FAM186AA6NE01 2351 aa23.11■■□□□ 1.29
C9orf3-208ENST00000451893 GRIK1P39086 918 aa23.11■■□□□ 1.29
C9orf3-208ENST00000451893 SOX9P48436 509 aa23.11■■□□□ 1.29
C9orf3-208ENST00000451893 CCR3P51677 355 aa23.11■■□□□ 1.29
C9orf3-208ENST00000451893 CXorf38Q8TB03 319 aa23.11■■□□□ 1.29
C9orf3-208ENST00000451893 SPATA20Q8TB22 786 aa23.11■■□□□ 1.29
C9orf3-208ENST00000451893 SECISBP2LQ93073 1101 aaKnown RBP23.11■■□□□ 1.29
C9orf3-208ENST00000451893 GSDMAQ96QA5 445 aa23.11■■□□□ 1.29
C9orf3-208ENST00000451893 SLC46A2Q9BY10 475 aa23.11■■□□□ 1.29
C9orf3-208ENST00000451893 GTPBP4Q9BZE4 634 aaKnown RBP23.11■■□□□ 1.29
C9orf3-208ENST00000451893 RBSNQ9H1K0 784 aa23.11■■□□□ 1.29
C9orf3-208ENST00000451893 CHRDQ9H2X0 955 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms