RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 SPATA32Q96LK8 384 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 GCNAQ96QF7 691 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 TRMT61BQ9BVS5 477 aaKnown RBP9.32□□□□□ -0.92
RFX3-209ENST00000451859 LRRC3Q9BY71 257 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 AGPAT3Q9NRZ7 376 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 INTS13Q9NVM9 706 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 SPATA6Q9NWH7 488 aaPredicted RBP9.32□□□□□ -0.92
RFX3-209ENST00000451859 RCOR1Q9UKL0 485 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 ITGA11Q9UKX5 1188 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 NDRG2Q9UN36 371 aaKnown RBP9.32□□□□□ -0.92
RFX3-209ENST00000451859 MAGED2Q9UNF1 606 aaPredicted RBP9.32□□□□□ -0.92
RFX3-209ENST00000451859 ZDHHC9Q9Y397 364 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 MTF2Q9Y483 593 aaPredicted RBP9.32□□□□□ -0.92
RFX3-209ENST00000451859 PCDHB5Q9Y5E4 795 aa9.32□□□□□ -0.92
RFX3-209ENST00000451859 UBE4BO95155 1302 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 FAM170BA6NMN3 283 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 KIAA0391O15091 583 aaKnown RBP9.31□□□□□ -0.92
RFX3-209ENST00000451859 TGFB1I1O43294 461 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 ACTN4O43707 911 aaKnown RBP9.31□□□□□ -0.92
RFX3-209ENST00000451859 MICAL2O94851 1124 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 PSMC3P17980 439 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 TARSP26639 723 aaKnown RBP9.31□□□□□ -0.92
RFX3-209ENST00000451859 TUFMP49411 452 aaKnown RBP9.31□□□□□ -0.92
RFX3-209ENST00000451859 PSMC1P62191 440 aaKnown RBP9.31□□□□□ -0.92
RFX3-209ENST00000451859 KRT85P78386 507 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 MYL7Q01449 175 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 PRKCQQ04759 706 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 MYO1EQ12965 1108 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 SURF1Q15526 300 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 ARHGAP15Q53QZ3 475 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 INTS6LQ5JSJ4 861 aaKnown RBP9.31□□□□□ -0.92
RFX3-209ENST00000451859 ATL3Q6DD88 541 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 GAREM2Q75VX8 874 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 ASCL5Q7RTU5 278 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 ARID3BQ8IVW6 561 aaPredicted RBP9.31□□□□□ -0.92
RFX3-209ENST00000451859 LRRC52Q8N7C0 313 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 TTC16Q8NEE8 873 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 TTC8Q8TAM2 541 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 SPPL2BQ8TCT7 592 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 LEO1Q8WVC0 666 aaPredicted RBP9.31□□□□□ -0.92
RFX3-209ENST00000451859 PAGE5Q96GU1 130 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 HPDLQ96IR7 371 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 ZFYVE19Q96K21 471 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 FNBP1Q96RU3 617 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 SMG9Q9H0W8 520 aaKnown RBP9.31□□□□□ -0.92
RFX3-209ENST00000451859 LTB4R2Q9NPC1 389 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 EXOC1Q9NV70 894 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 GTF3C4Q9UKN8 822 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 ASB3Q9Y575 518 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 R4GN57 208 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 KIAA1549LQ6ZVL6 1849 aa9.31□□□□□ -0.92
RFX3-209ENST00000451859 SPAG17Q6Q759 2223 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 SLC38A8A6NNN8 435 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 ZNF263O14978 683 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 ATP2C2O75185 946 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 PRAMEF12O95522 483 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 SLFN14P0C7P3 912 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 HAPLN1P10915 354 aaPredicted RBP9.3□□□□□ -0.92
RFX3-209ENST00000451859 CYP2F1P24903 491 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 CASP4P49662 377 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 CYP24A1Q07973 514 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 EHHADHQ08426 723 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 DDR2Q16832 855 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 DUOXA2Q1HG44 320 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 KMT5BQ4FZB7 885 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 CNNM4Q6P4Q7 775 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 TRAPPC11Q7Z392 1133 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 SPATA2LQ8IUW3 424 aaPredicted RBP9.3□□□□□ -0.92
RFX3-209ENST00000451859 WDR49Q8IV35 697 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 C1orf210Q8IVY1 113 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 SCN4BQ8IWT1 228 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 TMEM86AQ8N2M4 240 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 XXYLT1Q8NBI6 393 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 CXorf38Q8TB03 319 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 CSGALNACT1Q8TDX6 532 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 C2orf15Q8WU43 125 aaKnown RBP9.3□□□□□ -0.92
RFX3-209ENST00000451859 DEPDC1BQ8WUY9 529 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 DNASE1L2Q92874 299 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 IRF7Q92985 503 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 NKD2Q969F2 451 aaPredicted RBP9.3□□□□□ -0.92
RFX3-209ENST00000451859 MMS19Q96T76 1030 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 CGRRF1Q99675 332 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 MKNK1Q9BUB5 465 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 BCO2Q9BYV7 579 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 GPR88Q9GZN0 384 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 GDPD2Q9HCC8 539 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 KIAA1586Q9HCI6 787 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 DLGAP2Q9P1A6 1054 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 PIAS3Q9Y6X2 628 aa9.3□□□□□ -0.92
RFX3-209ENST00000451859 SPTBN4Q9H254 2564 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 PVALEFA0A1B0GWK0 134 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 MYBPHLA2RUH7 354 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 PRR23AA6NEV1 266 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 KLRC4O43908 158 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 EXOC3O60645 756 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 PHACTR2O75167 634 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 PDGFRBP09619 1106 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 LMO2P25791 158 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 PCSK1P29120 753 aa9.29□□□□□ -0.92
RFX3-209ENST00000451859 CDC25CP30307 473 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms