RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 ARNTLO00327 626 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 CALUO43852 315 aaPredicted RBP17.15■□□□□ 0.34
SGCE-208ENST00000450385 GFRA3O60609 400 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 NOL4O94818 638 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 CST3P01034 146 aaPredicted RBP17.15■□□□□ 0.34
SGCE-208ENST00000450385 RPN1P04843 607 aaKnown RBP17.15■□□□□ 0.34
SGCE-208ENST00000450385 GJA1P17302 382 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 CASP1P29466 404 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 VIPR2P41587 438 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 PDE6CP51160 858 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 NDUFA8P51970 172 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 NLRP12P59046 1061 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 TNNC1P63316 161 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 ZNF268Q14587 947 aaPredicted RBP17.15■□□□□ 0.34
SGCE-208ENST00000450385 PPP2R5DQ14738 602 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 CMTM8Q8IZV2 173 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 KIAA1958Q8N8K9 716 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 KIAA0895Q8NCT3 520 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 MYCBPAPQ8TBZ2 947 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 TMC2Q8TDI7 906 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 MRPS31Q92665 395 aaKnown RBP17.15■□□□□ 0.34
SGCE-208ENST00000450385 TAF4BQ92750 862 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 CCDC127Q96BQ5 260 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 MMS19Q96T76 1030 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 PI4K2AQ9BTU6 479 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 FAM126AQ9BYI3 521 aaPredicted RBP17.15■□□□□ 0.34
SGCE-208ENST00000450385 FOXQ1Q9C009 403 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 SNX25Q9H3E2 840 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 HEBP1Q9NRV9 189 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 TMLHEQ9NVH6 421 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 FRMD4BQ9Y2L6 1034 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 PTPRDP23468 1912 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 TICRRQ7Z2Z1 1910 aa17.15■□□□□ 0.34
SGCE-208ENST00000450385 FAM186AA6NE01 2351 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 PHACTR2O75167 634 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 SOAT2O75908 522 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 P4HA1P13674 534 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 RPL13P26373 211 aaKnown RBP17.14■□□□□ 0.33
SGCE-208ENST00000450385 AVPR1AP37288 418 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 AMPD2Q01433 879 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 GRM2Q14416 872 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 WDR72Q3MJ13 1102 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 LMBRD2Q68DH5 695 aaPredicted RBP17.14■□□□□ 0.33
SGCE-208ENST00000450385 MON1AQ86VX9 555 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 RALGPS2Q86X27 583 aaPredicted RBP17.14■□□□□ 0.33
SGCE-208ENST00000450385 GRAMD1CQ8IYS0 662 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 ST13P5Q8NFI4 369 aaPredicted RBP17.14■□□□□ 0.33
SGCE-208ENST00000450385 BPIFB1Q8TDL5 484 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 GIPC2Q8TF65 315 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 KBTBD7Q8WVZ9 684 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 PHOX2BQ99453 314 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 SYT15Q9BQS2 421 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 OBSL1O75147 1896 aa17.14■□□□□ 0.33
SGCE-208ENST00000450385 PATJQ8NI35 1801 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 MYBPHLA2RUH7 354 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 NRG2O14511 850 aaPredicted RBP17.13■□□□□ 0.33
SGCE-208ENST00000450385 TRIM66O15016 1216 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 LAMTOR5O43504 91 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 ZNF202O95125 648 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 CYP2F1P24903 491 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 DPYDQ12882 1025 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 SGSM1Q2NKQ1 1148 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 KRBA2Q6ZNG9 492 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 OSTM1Q86WC4 334 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 ZNF687Q8N1G0 1237 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 SYNPOQ8N3V7 929 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 GUF1Q8N442 669 aaKnown RBP17.13■□□□□ 0.33
SGCE-208ENST00000450385 FAM3CQ92520 227 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 ZNF516Q92618 1163 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 EXOC4Q96A65 974 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 SLC46A2Q9BY10 475 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 XYLT2Q9H1B5 865 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 TDP1Q9NUW8 608 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 PIAS3Q9Y6X2 628 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 ANAPC1Q9H1A4 1944 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 COL4A2P08572 1712 aa17.13■□□□□ 0.33
SGCE-208ENST00000450385 CFAP54Q96N23 3096 aa17.12■□□□□ 0.33
SGCE-208ENST00000450385 C4BPAP04003 597 aaKnown RBP17.12■□□□□ 0.33
SGCE-208ENST00000450385 NR3C1P04150 777 aa17.12■□□□□ 0.33
SGCE-208ENST00000450385 SP9P0CG40 484 aa17.12■□□□□ 0.33
SGCE-208ENST00000450385 TRIM21P19474 475 aaKnown RBP17.12■□□□□ 0.33
SGCE-208ENST00000450385 ACAT1P24752 427 aaKnown RBP17.12■□□□□ 0.33
SGCE-208ENST00000450385 LMO2P25791 158 aa17.12■□□□□ 0.33
SGCE-208ENST00000450385 TARSP26639 723 aaKnown RBP17.12■□□□□ 0.33
SGCE-208ENST00000450385 NRLP54845 237 aa17.12■□□□□ 0.33
SGCE-208ENST00000450385 MCCD1P59942 119 aaPredicted RBP17.12■□□□□ 0.33
SGCE-208ENST00000450385 FZD5Q13467 585 aa17.12■□□□□ 0.33
SGCE-208ENST00000450385 TMEM150AQ86TG1 271 aa17.12■□□□□ 0.33
SGCE-208ENST00000450385 FAXDC2Q96IV6 333 aa17.12■□□□□ 0.33
SGCE-208ENST00000450385 TNIP3Q96KP6 325 aa17.12■□□□□ 0.33
SGCE-208ENST00000450385 C8orf48Q96LL4 319 aa17.12■□□□□ 0.33
SGCE-208ENST00000450385 GZF1Q9H116 711 aaPredicted RBP17.12■□□□□ 0.33
SGCE-208ENST00000450385 FAM86C1Q9NVL1 165 aa17.12■□□□□ 0.33
SGCE-208ENST00000450385 SPATA6Q9NWH7 488 aaPredicted RBP17.12■□□□□ 0.33
SGCE-208ENST00000450385 HOOK1Q9UJC3 728 aaKnown RBP17.12■□□□□ 0.33
SGCE-208ENST00000450385 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
SGCE-208ENST00000450385 GOLGA6L4A6NEF3 574 aa17.11■□□□□ 0.33
SGCE-208ENST00000450385 PRR23AA6NEV1 266 aa17.11■□□□□ 0.33
SGCE-208ENST00000450385 SLC38A8A6NNN8 435 aa17.11■□□□□ 0.33
SGCE-208ENST00000450385 TCF3P15923 654 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms