RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 STOX2Q9P2F5 926 aaPredicted RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 IGSF9Q9P2J2 1179 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 FAM8A1Q9UBU6 413 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 BTBD3Q9Y2F9 522 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TPRKBQ9Y3C4 175 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 GRIP1Q9Y3R0 1128 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 FAM32AQ9Y421 112 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 PCDHGA10Q9Y5H3 936 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 BCL9O00512 1426 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PALLDQ8WX93 1383 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TYW5A2RUC4 315 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 ZNF233A6NK53 670 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 E9PBE3 544 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 DDX3XO00571 662 aaKnown RBP eCLIP2.29□□□□□ -2.04
USP53-202ENST00000450251 FBP2O00757 339 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 OPLAHO14841 1288 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 SORBS3O60504 671 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CRTAPO75718 401 aaPredicted RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 FKBP9O95302 570 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 IFNA7P01567 189 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 OR52Z1P0C646 297 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ATF4P18848 351 aaPredicted RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 GRK2P25098 689 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 EPHB2P29323 1055 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CRABP2P29373 138 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ADSSP30520 456 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CLK1P49759 484 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 NAPAP54920 295 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PSMC6P62333 389 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 AMPD2Q01433 879 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 FOLH1Q04609 750 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 SPIRE1Q08AE8 756 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 FOXD4Q12950 439 aaPredicted RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 USP4Q13107 963 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PPIL2Q13356 520 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 MSLNQ13421 630 aaPredicted RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 COL19A1Q14993 1142 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 NCAPHQ15003 741 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TNNI3KQ59H18 835 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 HERC4Q5GLZ8 1057 aaPredicted RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 WDR45BQ5MNZ6 344 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 GARNL3Q5VVW2 1013 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TSHZ3Q63HK5 1081 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 SULT1C3Q6IMI6 304 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TXNDC11Q6PKC3 985 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 BNIPLQ7Z465 357 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ADGRG6Q86SQ4 1221 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 DNAAF5Q86Y56 855 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 FAM178BQ8IXR5 827 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 BBS5Q8N3I7 341 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 SRBD1Q8N5C6 995 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 C8orf58Q8NAV2 365 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ANGPTL6Q8NI99 470 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 SP7Q8TDD2 431 aaPredicted RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 HELQQ8TDG4 1101 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 OTUD7AQ8TE49 926 aaPredicted RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 ASZ1Q8WWH4 475 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 DHX38Q92620 1227 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 NECTIN2Q92692 538 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 KRT35Q92764 455 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 GLMNQ92990 594 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 BTBD6Q96KE9 485 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 C7orf26Q96N11 449 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ZNF285Q96NJ3 590 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 C17orf80Q9BSJ5 609 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ADNPQ9H2P0 1102 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PIGUQ9H490 435 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CACNA2D2Q9NY47 1150 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 EHD3Q9NZN3 535 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 KLHL3Q9UH77 587 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CDYLQ9Y232 598 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 MAP3K2Q9Y2U5 619 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CBY1Q9Y3M2 126 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 FPGT-TNNI3KV9GXZ4 949 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 C1orf232A0A0U1RR37 186 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TTC26A0AVF1 554 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 SH3D21A4FU49 640 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 SPDYE5A6NIY4 337 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 LRRC53A6NM62 1247 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 EIF4E1BA6NMX2 242 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 AP5Z1O43299 807 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 AKAP10O43572 662 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ECE2O60344 883 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 DFNA5O60443 496 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CCNKO75909 580 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 LDHCP07864 332 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TMEM253P0C7T8 217 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TPBGLP0DKB5 382 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 RAG1P15918 1043 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 POLR2BP30876 1174 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 CXCR5P32302 372 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 RORAP35398 523 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PIK3CAP42336 1068 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 MAPKAPK2P49137 400 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CCT3P49368 545 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 PTENP60484 403 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 RAB4BP61018 213 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 VBP1P61758 197 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 GPC5P78333 572 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CYP4F8P98187 520 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms