RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 BMT2Q1RMZ1 405 aa23.49■■□□□ 1.35
CPSF7-208ENST00000450000 CFAP221Q4G0U5 840 aa23.49■■□□□ 1.35
CPSF7-208ENST00000450000 RALGPS2Q86X27 583 aaPredicted RBP23.49■■□□□ 1.35
CPSF7-208ENST00000450000 TTC16Q8NEE8 873 aa23.49■■□□□ 1.35
CPSF7-208ENST00000450000 OR6B3Q8NGW1 331 aa23.49■■□□□ 1.35
CPSF7-208ENST00000450000 PAGE5Q96GU1 130 aa23.49■■□□□ 1.35
CPSF7-208ENST00000450000 CHRDQ9H2X0 955 aa23.49■■□□□ 1.35
CPSF7-208ENST00000450000 KIF9Q9HAQ2 790 aa23.49■■□□□ 1.35
CPSF7-208ENST00000450000 PCDHGA2Q9Y5H1 932 aa23.49■■□□□ 1.35
CPSF7-208ENST00000450000 A0A1B0GVL5 298 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 SOBPA7XYQ1 873 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 PRAMEF12O95522 483 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 F11P03951 625 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 HMGA1P17096 107 aaKnown RBP23.48■■□□□ 1.35
CPSF7-208ENST00000450000 CMA1P23946 247 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 GNL1P36915 607 aaPredicted RBP23.48■■□□□ 1.35
CPSF7-208ENST00000450000 CCR3P51677 355 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 NRLP54845 237 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 EHHADHQ08426 723 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 WDR72Q3MJ13 1102 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 TXNDC8Q6A555 127 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 SCARA3Q6AZY7 606 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 MAML2Q8IZL2 1156 aaPredicted RBP23.48■■□□□ 1.35
CPSF7-208ENST00000450000 TDP1Q9NUW8 608 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 ZSCAN32Q9NX65 697 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 GTSE1Q9NYZ3 720 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 EHD2Q9NZN4 543 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 TCHHQ07283 1943 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 NCANO14594 1321 aa23.48■■□□□ 1.35
CPSF7-208ENST00000450000 SPECC1L-ADORA2AF8WAN1 911 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 ARNTLO00327 626 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 KIF20AO95235 890 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 MYL1P05976 194 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 PFKFB1P16118 471 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 WARSP23381 471 aaKnown RBP23.47■■□□□ 1.35
CPSF7-208ENST00000450000 SOX9P48436 509 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 AMPD2Q01433 879 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 ITPRIPL2Q3MIP1 535 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 TSSK4Q6SA08 328 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 VSTM1Q6UX27 236 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 MON1AQ86VX9 555 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 C12orf56Q8IXR9 622 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 STKLD1Q8NE28 680 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 SECISBP2LQ93073 1101 aaKnown RBP23.47■■□□□ 1.35
CPSF7-208ENST00000450000 MYLPFQ96A32 169 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 SYAP1Q96A49 352 aaPredicted RBP23.47■■□□□ 1.35
CPSF7-208ENST00000450000 FAM126AQ9BYI3 521 aaPredicted RBP23.47■■□□□ 1.35
CPSF7-208ENST00000450000 GKN1Q9NS71 199 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 NXF1Q9UBU9 619 aaKnown RBP23.47■■□□□ 1.35
CPSF7-208ENST00000450000 COL4A3Q01955 1670 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 TSC2P49815 1807 aa23.47■■□□□ 1.35
CPSF7-208ENST00000450000 HCRTO43612 131 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 ATP2C2O75185 946 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 NOL4O94818 638 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 CST3P01034 146 aaPredicted RBP23.46■■□□□ 1.35
CPSF7-208ENST00000450000 LMO2P25791 158 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 ATICP31939 592 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 MAGEA11P43364 429 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 SYKP43405 635 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 AP3M2P53677 418 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 KMT5BQ4FZB7 885 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 DGKKQ5KSL6 1271 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 FAM171BQ6P995 826 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 KBTBD7Q8WVZ9 684 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 RUBCNQ92622 972 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 EXOC4Q96A65 974 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 TRMT2BQ96GJ1 504 aaKnown RBP23.46■■□□□ 1.35
CPSF7-208ENST00000450000 CCDC34Q96HJ3 373 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 LRRC3BQ96PB8 259 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 PKMYT1Q99640 499 aa23.46■■□□□ 1.35
CPSF7-208ENST00000450000 MIA3Q5JRA6 1907 aa23.45■■□□□ 1.35
CPSF7-208ENST00000450000 TRAV19A0A0A6YYK7 116 aa23.45■■□□□ 1.34
CPSF7-208ENST00000450000 ACTN4O43707 911 aaKnown RBP23.45■■□□□ 1.34
CPSF7-208ENST00000450000 CKMP06732 381 aa23.45■■□□□ 1.34
CPSF7-208ENST00000450000 USP17L7P0C7H9 530 aa23.45■■□□□ 1.34
CPSF7-208ENST00000450000 BDNFP23560 247 aa23.45■■□□□ 1.34
CPSF7-208ENST00000450000 CTHP32929 405 aa23.45■■□□□ 1.34
CPSF7-208ENST00000450000 CXCL12P48061 93 aa23.45■■□□□ 1.34
CPSF7-208ENST00000450000 FZD5Q13467 585 aa23.45■■□□□ 1.34
CPSF7-208ENST00000450000 NCDNQ9UBB6 729 aa23.45■■□□□ 1.34
CPSF7-208ENST00000450000 SHISA7A6NL88 538 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 A8MXQ7 604 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 TRIM66O15016 1216 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 TACC1O75410 805 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 FAM163BP0C2L3 166 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 CHRNB1P11230 501 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 PDE6CP51160 858 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 TNK2Q07912 1038 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 STK4Q13043 487 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 KCNB1Q14721 858 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 PON2Q15165 354 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 MDH1BQ5I0G3 518 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 TMEM150AQ86TG1 271 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 MYCBPAPQ8TBZ2 947 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 USP13Q92995 863 aaPredicted RBP23.44■■□□□ 1.34
CPSF7-208ENST00000450000 MYRFLQ96LU7 910 aa23.44■■□□□ 1.34
CPSF7-208ENST00000450000 MRPL45Q9BRJ2 306 aaKnown RBP23.44■■□□□ 1.34
CPSF7-208ENST00000450000 SCAND2PQ9GZW5 306 aaPredicted RBP23.44■■□□□ 1.34
CPSF7-208ENST00000450000 PRMT8Q9NR22 394 aaPredicted RBP23.44■■□□□ 1.34
CPSF7-208ENST00000450000 RAB23Q9ULC3 237 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms