RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 GABRR2P28476 465 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 GJA4P35212 333 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 BRCC3P46736 316 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 ALDH1A3P47895 512 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 NPEPPSP55786 919 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 TLE3Q04726 772 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 ZNF33AQ06730 810 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 MRPL58Q14197 206 aaKnown RBP8.64□□□□□ -1.03
LINC01961-201ENST00000449954 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 PLEKHG6Q3KR16 790 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 HSF5Q4G112 596 aaPredicted RBP8.64□□□□□ -1.03
LINC01961-201ENST00000449954 TRIM68Q6AZZ1 485 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 CC2D1AQ6P1N0 951 aaPredicted RBP8.64□□□□□ -1.03
LINC01961-201ENST00000449954 B3GNT9Q6UX72 402 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 PRICKLE2Q7Z3G6 844 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 ITIH5Q86UX2 942 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 TMPRSS12Q86WS5 348 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 TTC30AQ86WT1 665 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 MB21D2Q8IYB1 491 aaPredicted RBP8.64□□□□□ -1.03
LINC01961-201ENST00000449954 EXOC6Q8TAG9 804 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 RNF217Q8TC41 542 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 SETD7Q8WTS6 366 aaKnown RBP8.64□□□□□ -1.03
LINC01961-201ENST00000449954 PSMG2Q969U7 264 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 MED8Q96G25 268 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 PRIMPOLQ96LW4 560 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 DNAJC25Q9H1X3 360 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 BCCIPQ9P287 314 aaKnown RBP eCLIP8.64□□□□□ -1.03
LINC01961-201ENST00000449954 CREBBPQ92793 2442 aa8.64□□□□□ -1.03
LINC01961-201ENST00000449954 BOD1L1Q8NFC6 3051 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 ESYT2A0FGR8 921 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 FAM149AA5PLN7 773 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 I3L4J1 428 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 MEN1O00255 615 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 PLK4O00444 970 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 ATXN1LP0C7T5 689 aaKnown RBP8.63□□□□□ -1.03
LINC01961-201ENST00000449954 ARSAP15289 507 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 GNSP15586 552 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 CDC25CP30307 473 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 HNF1BP35680 557 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 AVPR1AP37288 418 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 CCR10P46092 362 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 QARSP47897 775 aaKnown RBP8.63□□□□□ -1.03
LINC01961-201ENST00000449954 UCNP55089 124 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 RIPPLY3P57055 190 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 SEMG2Q02383 582 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 BFSP1Q12934 665 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 GRIK2Q13002 908 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 SERINC3Q13530 473 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 CD300LGQ6UXG3 332 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 ZNF574Q6ZN55 896 aaPredicted RBP8.63□□□□□ -1.03
LINC01961-201ENST00000449954 CDR2LQ86X02 465 aaPredicted RBP8.63□□□□□ -1.03
LINC01961-201ENST00000449954 MARCH9Q86YJ5 346 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 CMTM8Q8IZV2 173 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 FANCBQ8NB91 859 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 C3orf58Q8NDZ4 430 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 ENGASEQ8NFI3 743 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 BEST2Q8NFU1 509 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 TMEM87BQ96K49 555 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 PNMA5Q96PV4 448 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 PPP1R10Q96QC0 940 aaKnown RBP8.63□□□□□ -1.03
LINC01961-201ENST00000449954 OXCT2Q9BYC2 517 aaPredicted RBP8.63□□□□□ -1.03
LINC01961-201ENST00000449954 SEMA4CQ9C0C4 833 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 RBM28Q9NW13 759 aaKnown RBP8.63□□□□□ -1.03
LINC01961-201ENST00000449954 SLC12A7Q9Y666 1083 aa8.63□□□□□ -1.03
LINC01961-201ENST00000449954 SLC35F4A4IF30 521 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 SH2B2O14492 632 aaPredicted RBP8.62□□□□□ -1.03
LINC01961-201ENST00000449954 N4BP3O15049 544 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 CER1O95813 267 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 VSIG8P0DPA2 414 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 U2AF2P26368 475 aaKnown RBP eCLIP8.62□□□□□ -1.03
LINC01961-201ENST00000449954 ADSSP30520 456 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 LIFRP42702 1097 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 TMPRSS3P57727 454 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 MRPS21P82921 87 aaKnown RBP8.62□□□□□ -1.03
LINC01961-201ENST00000449954 SCRN1Q12765 414 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 CAPSQ13938 189 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 ANKRD45Q5TZF3 282 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 NAIF1Q69YI7 327 aaPredicted RBP8.62□□□□□ -1.03
LINC01961-201ENST00000449954 OTUD6AQ7L8S5 288 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 FRMD1Q8N878 549 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 ZSCAN1Q8NBB4 408 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 APPL2Q8NEU8 664 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 CCDC12Q8WUD4 166 aaPredicted RBP8.62□□□□□ -1.03
LINC01961-201ENST00000449954 FGF11Q92914 225 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 ATP2A3Q93084 1043 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 CCDC136Q96JN2 1154 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 ADPGKQ9BRR6 497 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 ZMYND12Q9H0C1 365 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 ECT2Q9H8V3 914 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 GDPD2Q9HCC8 539 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 C6orf50Q9HD87 102 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 PRMT7Q9NVM4 692 aaPredicted RBP8.62□□□□□ -1.03
LINC01961-201ENST00000449954 PCDHGB2Q9Y5G2 931 aa8.62□□□□□ -1.03
LINC01961-201ENST00000449954 HEMK1Q9Y5R4 338 aaPredicted RBP8.62□□□□□ -1.03
LINC01961-201ENST00000449954 C2CD3Q4AC94 2353 aa8.61□□□□□ -1.03
LINC01961-201ENST00000449954 CEP192Q8TEP8 1941 aa8.61□□□□□ -1.03
LINC01961-201ENST00000449954 TNFSF14O43557 240 aa8.61□□□□□ -1.03
LINC01961-201ENST00000449954 PRC1O43663 620 aa8.61□□□□□ -1.03
LINC01961-201ENST00000449954 IGFBP6P24592 240 aaPredicted RBP8.61□□□□□ -1.03
LINC01961-201ENST00000449954 DDX6P26196 483 aaKnown RBP eCLIP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms