RNA–Protein interactions for RNA: ENST00000449850.1

KDM1B-202, Transcript of lysine demethylase 1B, humanhuman

TSL 5

Gene KDM1B, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-202ENST00000449850 PRDM5Q9NQX1 630 aaPredicted RBP12.72□□□□□ -0.37
KDM1B-202ENST00000449850 TDRD15B5MCY1 1934 aaKnown RBP12.72□□□□□ -0.37
KDM1B-202ENST00000449850 KIAA0355O15063 1070 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 ERBB2P04626 1255 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 CALB1P05937 261 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 PTPN1P18031 435 aaKnown RBP12.71□□□□□ -0.37
KDM1B-202ENST00000449850 LHX1P48742 406 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 DNA2P51530 1060 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 RPL7AP62424 266 aaKnown RBP12.71□□□□□ -0.37
KDM1B-202ENST00000449850 MESDQ14696 234 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 LIN9Q5TKA1 542 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 C11orf63Q6NUN7 778 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 PEX26Q7Z412 305 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 NPAS4Q8IUM7 802 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 SYCE1Q8N0S2 351 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 SLC2A14Q8TDB8 520 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 SLC35F5Q8WV83 523 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 HES6Q96HZ4 224 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 TNIP3Q96KP6 325 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 SUSD3Q96L08 255 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 ANAPC7Q9UJX3 599 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 LRFN2Q9ULH4 789 aa12.71□□□□□ -0.37
KDM1B-202ENST00000449850 PRG3Q9Y2Y8 225 aaPredicted RBP12.71□□□□□ -0.37
KDM1B-202ENST00000449850 TMEM189-UBE2V1I3L0A0 370 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 GABBR2O75899 941 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 ODC1P11926 461 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 GABRB2P47870 512 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 OR1G1P47890 313 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 CLCN6P51797 869 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 IKBKEQ14164 716 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 PPP1R15BQ5SWA1 713 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 PMF1Q6P1K2 205 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 PAQR9Q6ZVX9 377 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 XYLT1Q86Y38 959 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 CREG2Q8IUH2 290 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 FUKQ8N0W3 1084 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 CALR3Q96L12 384 aaKnown RBP12.71□□□□□ -0.38
KDM1B-202ENST00000449850 CRTAC1Q9NQ79 661 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 PRDM10Q9NQV6 1147 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 PARVAQ9NVD7 372 aa12.71□□□□□ -0.38
KDM1B-202ENST00000449850 ARGLU1Q9NWB6 273 aaPredicted RBP12.71□□□□□ -0.38
KDM1B-202ENST00000449850 PDE2AO00408 941 aaPredicted RBP12.7□□□□□ -0.38
KDM1B-202ENST00000449850 CLDN5O00501 218 aa12.7□□□□□ -0.38
KDM1B-202ENST00000449850 COMTP21964 271 aa12.7□□□□□ -0.38
KDM1B-202ENST00000449850 ADORA2BP29275 332 aa12.7□□□□□ -0.38
KDM1B-202ENST00000449850 RFC2P35250 354 aa12.7□□□□□ -0.38
KDM1B-202ENST00000449850 GSCP56915 257 aaPredicted RBP12.7□□□□□ -0.38
KDM1B-202ENST00000449850 CKAP4Q07065 602 aaKnown RBP12.7□□□□□ -0.38
KDM1B-202ENST00000449850 PDE4CQ08493 712 aa12.7□□□□□ -0.38
KDM1B-202ENST00000449850 ANKRD52Q8NB46 1076 aa12.7□□□□□ -0.38
KDM1B-202ENST00000449850 NOA1Q8NC60 698 aaKnown RBP12.7□□□□□ -0.38
KDM1B-202ENST00000449850 C3orf20Q8ND61 904 aa12.7□□□□□ -0.38
KDM1B-202ENST00000449850 C18orf8Q96DM3 657 aa12.7□□□□□ -0.38
KDM1B-202ENST00000449850 HNRNPABQ99729 332 aaKnown RBP12.7□□□□□ -0.38
KDM1B-202ENST00000449850 SCINQ9Y6U3 715 aa12.7□□□□□ -0.38
KDM1B-202ENST00000449850 MYBPHLA2RUH7 354 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 TBKBP1A7MCY6 615 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 TMEM110-MUSTN1A8MSY1 372 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 E5RJQ4 531 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 PIK3R2O00459 728 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 NRP1O14786 923 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 DDX3YO15523 660 aaKnown RBP12.69□□□□□ -0.38
KDM1B-202ENST00000449850 UPP2O95045 317 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 RHOXF2BP0C7M4 288 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 CAPN2P17655 700 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 TCP1P17987 556 aaKnown RBP12.69□□□□□ -0.38
KDM1B-202ENST00000449850 PAX3P23760 479 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 RGS7P49802 495 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 RPS6KA1Q15418 735 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 MDH1BQ5I0G3 518 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 MFSD5Q6N075 450 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 CD101Q93033 1021 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 PIWIL1Q96J94 861 aaKnown RBP12.69□□□□□ -0.38
KDM1B-202ENST00000449850 FAM193BQ96PV7 902 aaPredicted RBP12.69□□□□□ -0.38
KDM1B-202ENST00000449850 SYT15Q9BQS2 421 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 RHOXF2Q9BQY4 288 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 PARD6BQ9BYG5 372 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 ANKZF1Q9H8Y5 726 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 MRPL47Q9HD33 250 aaKnown RBP12.69□□□□□ -0.38
KDM1B-202ENST00000449850 ST7Q9NRC1 585 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 EHD2Q9NZN4 543 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 HESX1Q9UBX0 185 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 AMFRQ9UKV5 643 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 TMEM191CA6NGB0 347 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 HOXA2O43364 376 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 BEST1O76090 585 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 RAG1P15918 1043 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 PBX3P40426 434 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 SLC11A1P49279 550 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 OGDHQ02218 1023 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 ZNF252P-AS1Q0IIN9 211 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 BST2Q10589 180 aaKnown RBP12.69□□□□□ -0.38
KDM1B-202ENST00000449850 DAB2IPQ5VWQ8 1189 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 DNAJC24Q6P3W2 148 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 TMCO2Q7Z6W1 182 aaPredicted RBP12.69□□□□□ -0.38
KDM1B-202ENST00000449850 OR10T2Q8NGX3 314 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 FEZF2Q8TBJ5 459 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 ALG3Q92685 438 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 PCED1BQ96HM7 432 aa12.69□□□□□ -0.38
KDM1B-202ENST00000449850 MCEEQ96PE7 176 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms