RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 COMTP21964 271 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 GPD2P43304 727 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 ALDH7A1P49419 539 aaKnown RBP10.23□□□□□ -0.77
RFC4-210ENST00000449502 RGS7P49802 495 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 TERF1P54274 439 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 TUBB4BP68371 445 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 YWHAHQ04917 246 aaPredicted RBP10.23□□□□□ -0.77
RFC4-210ENST00000449502 MAMLD1Q13495 774 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 CFAP221Q4G0U5 840 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 C2CD6Q53TS8 623 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 ZFYVE27Q5T4F4 411 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 CYP4A22Q5TCH4 519 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 PLEKHA7Q6IQ23 1121 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.23□□□□□ -0.77
RFC4-210ENST00000449502 SLFN11Q7Z7L1 901 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 CTAGE6Q86UF2 777 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 ZDHHC17Q8IUH5 632 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 CTAGE4Q8IX94 777 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 DCP1BQ8IZD4 617 aaKnown RBP10.23□□□□□ -0.77
RFC4-210ENST00000449502 WDTC1Q8N5D0 677 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 LRRC57Q8N9N7 239 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 C3orf20Q8ND61 904 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 C3orf58Q8NDZ4 430 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 MYRIPQ8NFW9 859 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 TRIM43Q96BQ3 446 aaPredicted RBP10.23□□□□□ -0.77
RFC4-210ENST00000449502 PBKQ96KB5 322 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 CAPZA3Q96KX2 299 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 OSBPL9Q96SU4 736 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 PSMB7Q99436 277 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 HNRNPABQ99729 332 aaKnown RBP10.23□□□□□ -0.77
RFC4-210ENST00000449502 ACBD6Q9BR61 282 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 PAAF1Q9BRP4 392 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 PLVAPQ9BX97 442 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 NRDE2Q9H7Z3 1164 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 LRRC4Q9HBW1 653 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 RNF14Q9UBS8 474 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 COG5Q9UP83 839 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 ALG6Q9Y672 507 aa10.23□□□□□ -0.77
RFC4-210ENST00000449502 SF3B1O75533 1304 aaKnown RBP eCLIP10.23□□□□□ -0.772e-6■■■■■ 37.9
RFC4-210ENST00000449502 UQCRHLA0A096LP55 91 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 ZBBXA8MT70 800 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 NRP1O14786 923 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 SYN3O14994 580 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 HCRTO43612 131 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 CEP104O60308 925 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 SRGAP2O75044 1071 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 BAIAP3O94812 1187 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 UQCRHP07919 91 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 CETN2P41208 172 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 GATMP50440 423 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 PDE4CQ08493 712 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 PTP4A2Q12974 167 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 PIGHQ14442 188 aaPredicted RBP10.22□□□□□ -0.77
RFC4-210ENST00000449502 CLUL1Q15846 466 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 PTPROQ16827 1216 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 TCTN1Q2MV58 587 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 PTPN20Q4JDL3 420 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 INTS6LQ5JSJ4 861 aaKnown RBP10.22□□□□□ -0.77
RFC4-210ENST00000449502 FAM102AQ5T9C2 384 aaPredicted RBP10.22□□□□□ -0.77
RFC4-210ENST00000449502 CCDC70Q6NSX1 233 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 C4orf50Q6ZRC1 276 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 NT5DC3Q86UY8 548 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 CEP57Q86XR8 500 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 SPATA2LQ8IUW3 424 aaPredicted RBP10.22□□□□□ -0.77
RFC4-210ENST00000449502 MYCBPAPQ8TBZ2 947 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 STK32AQ8WU08 396 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 UBXN4Q92575 508 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 GOLGA1Q92805 767 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 BTBD6Q96KE9 485 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 HSFY1Q96LI6 401 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 MCEEQ96PE7 176 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 CPXM1Q96SM3 734 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 DUSP16Q9BY84 665 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 IL23AQ9NPF7 189 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 CYLDQ9NQC7 956 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 ADAM28Q9UKQ2 775 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 PACSIN2Q9UNF0 486 aaPredicted RBP10.22□□□□□ -0.77
RFC4-210ENST00000449502 USTQ9Y2C2 406 aa10.22□□□□□ -0.77
RFC4-210ENST00000449502 CCDC66A2RUB6 948 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 SIGLEC16A6NMB1 481 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 E5RJQ4 531 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 H7C4K7 107 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 CES2O00748 559 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 XPO1O14980 1071 aaKnown RBP10.21□□□□□ -0.77
RFC4-210ENST00000449502 FANCGO15287 622 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 ATP2C2O75185 946 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 AP1G2O75843 785 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 PROSCO94903 275 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 FGBP02675 491 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 ERBB2P04626 1255 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 ACRP10323 421 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 LCP1P13796 627 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 NPR3P17342 541 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 PSMA2P25787 234 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 CXCR5P32302 372 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 MAN1A1P33908 653 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 SLC11A1P49279 550 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 RNASE9P60153 205 aaKnown RBP10.21□□□□□ -0.77
RFC4-210ENST00000449502 AMPD2Q01433 879 aa10.21□□□□□ -0.77
RFC4-210ENST00000449502 PLCB3Q01970 1234 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms