RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 PASD1Q8IV76 773 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 C17orf53Q8N3J3 647 aaPredicted RBP20.42■□□□□ 0.86
RPS28-202ENST00000449223 STK32AQ8WU08 396 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 PIK3R5Q8WYR1 880 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 PCED1BQ96HM7 432 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 HERC2P3Q9BVR0 1158 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 ZCWPW1Q9H0M4 648 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 RWDD3Q9Y3V2 267 aa20.42■□□□□ 0.86
RPS28-202ENST00000449223 A0A0A6YYK5 440 aaPredicted RBP20.41■□□□□ 0.86
RPS28-202ENST00000449223 A0A0U1RQJ8 604 aa20.41■□□□□ 0.86
RPS28-202ENST00000449223 MYBPHLA2RUH7 354 aa20.41■□□□□ 0.86
RPS28-202ENST00000449223 H7C4K7 107 aa20.41■□□□□ 0.86
RPS28-202ENST00000449223 M0QYV0 167 aa20.41■□□□□ 0.86
RPS28-202ENST00000449223 MYBL1P10243 752 aa20.41■□□□□ 0.86
RPS28-202ENST00000449223 CCDC130P13994 396 aa20.41■□□□□ 0.86
RPS28-202ENST00000449223 BCAT1P54687 386 aa20.41■□□□□ 0.86
RPS28-202ENST00000449223 PTP4A2Q12974 167 aa20.41■□□□□ 0.86
RPS28-202ENST00000449223 GOLGA7BQ2TAP0 167 aa20.41■□□□□ 0.86
RPS28-202ENST00000449223 MDH1BQ5I0G3 518 aa20.41■□□□□ 0.86
RPS28-202ENST00000449223 C1orf131Q8NDD1 294 aaKnown RBP20.41■□□□□ 0.86
RPS28-202ENST00000449223 SLC2A14Q8TDB8 520 aa20.41■□□□□ 0.86
RPS28-202ENST00000449223 ATRIPQ8WXE1 791 aa20.41■□□□□ 0.86
RPS28-202ENST00000449223 TRIM11Q96F44 468 aa20.41■□□□□ 0.86
RPS28-202ENST00000449223 TRMT1Q9NXH9 659 aaKnown RBP20.41■□□□□ 0.86
RPS28-202ENST00000449223 HESX1Q9UBX0 185 aa20.41■□□□□ 0.86
RPS28-202ENST00000449223 BACE2Q9Y5Z0 518 aa20.41■□□□□ 0.86
RPS28-202ENST00000449223 RANBP2P49792 3224 aaKnown RBP20.41■□□□□ 0.86
RPS28-202ENST00000449223 NCANO14594 1321 aa20.4■□□□□ 0.86
RPS28-202ENST00000449223 TMCO5BA8MYB1 307 aa20.4■□□□□ 0.86
RPS28-202ENST00000449223 RPL34P49207 117 aaKnown RBP20.4■□□□□ 0.86
RPS28-202ENST00000449223 GSCP56915 257 aaPredicted RBP20.4■□□□□ 0.86
RPS28-202ENST00000449223 DSG1Q02413 1049 aa20.4■□□□□ 0.86
RPS28-202ENST00000449223 BST2Q10589 180 aaKnown RBP20.4■□□□□ 0.86
RPS28-202ENST00000449223 TAS1R1Q7RTX1 841 aa20.4■□□□□ 0.86
RPS28-202ENST00000449223 MCOLN2Q8IZK6 566 aa20.4■□□□□ 0.86
RPS28-202ENST00000449223 SLC35F5Q8WV83 523 aa20.4■□□□□ 0.86
RPS28-202ENST00000449223 CPA5Q8WXQ8 436 aa20.4■□□□□ 0.86
RPS28-202ENST00000449223 LPIN3Q9BQK8 851 aa20.4■□□□□ 0.86
RPS28-202ENST00000449223 PLVAPQ9BX97 442 aa20.4■□□□□ 0.86
RPS28-202ENST00000449223 B3GNT5Q9BYG0 378 aa20.4■□□□□ 0.86
RPS28-202ENST00000449223 CYLDQ9NQC7 956 aa20.4■□□□□ 0.86
RPS28-202ENST00000449223 MTRRQ9UBK8 725 aa20.4■□□□□ 0.86
RPS28-202ENST00000449223 CYTH4Q9UIA0 394 aa20.4■□□□□ 0.86
RPS28-202ENST00000449223 GTF3C4Q9UKN8 822 aa20.4■□□□□ 0.86
RPS28-202ENST00000449223 PLXNA4Q9HCM2 1894 aa20.39■□□□□ 0.86
RPS28-202ENST00000449223 LCHNA4D1U4 455 aa20.39■□□□□ 0.85
RPS28-202ENST00000449223 TNRC18O15417 2968 aaPredicted RBP20.39■□□□□ 0.85
RPS28-202ENST00000449223 GABRB2P47870 512 aa20.39■□□□□ 0.85
RPS28-202ENST00000449223 RGS19P49795 217 aa20.39■□□□□ 0.85
RPS28-202ENST00000449223 SMARCB1Q12824 385 aa20.39■□□□□ 0.85
RPS28-202ENST00000449223 CCDC142Q17RM4 750 aa20.39■□□□□ 0.85
RPS28-202ENST00000449223 CTXN3Q4LDR2 81 aa20.39■□□□□ 0.85
RPS28-202ENST00000449223 ARHGAP29Q52LW3 1261 aa20.39■□□□□ 0.85
RPS28-202ENST00000449223 SLC8B1Q6J4K2 584 aa20.39■□□□□ 0.85
RPS28-202ENST00000449223 LRRTM3Q86VH5 581 aa20.39■□□□□ 0.85
RPS28-202ENST00000449223 CEP57Q86XR8 500 aa20.39■□□□□ 0.85
RPS28-202ENST00000449223 DCP1BQ8IZD4 617 aaKnown RBP20.39■□□□□ 0.85
RPS28-202ENST00000449223 CTNNBL1Q8WYA6 563 aaPredicted RBP20.39■□□□□ 0.85
RPS28-202ENST00000449223 NOX5Q96PH1 765 aa20.39■□□□□ 0.85
RPS28-202ENST00000449223 DUSP16Q9BY84 665 aa20.39■□□□□ 0.85
RPS28-202ENST00000449223 CSNK1G1Q9HCP0 422 aa20.39■□□□□ 0.85
RPS28-202ENST00000449223 AVENQ9NQS1 362 aaPredicted RBP20.39■□□□□ 0.85
RPS28-202ENST00000449223 PATJQ8NI35 1801 aa20.39■□□□□ 0.85
RPS28-202ENST00000449223 LINC01553A4QN01 128 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 C5orf67F2Z3F1 127 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 FGF18O76093 207 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 CALB1P05937 261 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 NPR3P17342 541 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 SSTR3P32745 418 aaPredicted RBP20.38■□□□□ 0.85
RPS28-202ENST00000449223 BMP8BP34820 402 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 PLA2G4AP47712 749 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 GPC5P78333 572 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 PDCLQ13371 301 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 NFE2Q16621 373 aaPredicted RBP20.38■□□□□ 0.85
RPS28-202ENST00000449223 CFAP221Q4G0U5 840 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 NYAP1Q6ZVC0 841 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 FAM35AQ86V20 835 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 RNF10Q8N5U6 811 aaKnown RBP20.38■□□□□ 0.85
RPS28-202ENST00000449223 RFFLQ8WZ73 363 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 SECISBP2LQ93073 1101 aaKnown RBP20.38■□□□□ 0.85
RPS28-202ENST00000449223 MYLPFQ96A32 169 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 FUBP3Q96I24 572 aaKnown RBP eCLIP20.38■□□□□ 0.85
RPS28-202ENST00000449223 B3GALT6Q96L58 329 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 TMEM209Q96SK2 561 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 THAP2Q9H0W7 228 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 TFR2Q9UP52 801 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 LZTS1Q9Y250 596 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 PCDHA11Q9Y5I1 949 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 MYH10P35580 1976 aa20.38■□□□□ 0.85
RPS28-202ENST00000449223 XPO1O14980 1071 aaKnown RBP20.37■□□□□ 0.85
RPS28-202ENST00000449223 ABL1P00519 1130 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 CYP1A2P05177 515 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 BMPR1AP36894 532 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 GLUD2P49448 558 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 HADHBP55084 474 aaKnown RBP20.37■□□□□ 0.85
RPS28-202ENST00000449223 KRT17Q04695 432 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 PTPN20Q4JDL3 420 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 C4orf50Q6ZRC1 276 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 DNAAF5Q86Y56 855 aa20.37■□□□□ 0.85
RPS28-202ENST00000449223 MSANTD4Q8NCY6 345 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms