RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 TAF12Q16514 161 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 MIIPQ5JXC2 388 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 TRIM65Q6PJ69 517 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 VSTM1Q6UX27 236 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 ENOSF1Q7L5Y1 443 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 ACOT1Q86TX2 421 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 ITIH5Q86UX2 942 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 DHX40Q8IX18 779 aaKnown RBP13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 CRYBG2Q8N1P7 616 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 MYLPFQ96A32 169 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 JAKMIP2Q96AA8 810 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 ZNF707Q96C28 371 aaPredicted RBP13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 PCED1BQ96HM7 432 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 CRACR2AQ9BSW2 395 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 VPS16Q9H269 839 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 DPEP3Q9H4B8 488 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 TMLHEQ9NVH6 421 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 LIMA1Q9UHB6 759 aaKnown RBP13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 ASB3Q9Y575 518 aa13.93□□□□□ -0.18
ERGIC3-209ENST00000447986 VNN2O95498 520 aa13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 HAPLN1P10915 354 aaPredicted RBP13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 IL9P15248 144 aa13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 ZNF18P17022 549 aa13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 PTPN2P17706 415 aa13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 MFAP3P55082 362 aa13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 LRSAM1Q6UWE0 723 aa13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 LEMD2Q8NC56 503 aa13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 ARID3AQ99856 593 aa13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 ANP32EQ9BTT0 268 aa13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 MED10Q9BTT4 135 aa13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 PHF7Q9BWX1 381 aaPredicted RBP13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 ELOVL4Q9GZR5 314 aa13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 WDR6Q9NNW5 1121 aaKnown RBP13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 APEX2Q9UBZ4 518 aa13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 PRKAG3Q9UGI9 489 aa13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 NME7Q9Y5B8 376 aa13.92□□□□□ -0.18
ERGIC3-209ENST00000447986 MTCL1Q9Y4B5 1905 aaKnown RBP13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 TRIM66O15016 1216 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 SLC9A1P19634 815 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 CYP2F1P24903 491 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 ANXA13P27216 316 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 GRIK1P39086 918 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 MAGEA11P43364 429 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 CDR1P51861 262 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 COPB1P53618 953 aaKnown RBP13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 IQCB1Q15051 598 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 ZNF394Q53GI3 561 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 CYP4A22Q5TCH4 519 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 RRAGAQ7L523 313 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 GRASPQ7Z6J2 395 aaPredicted RBP13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 SCN4BQ8IWT1 228 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 TTC9BQ8N6N2 239 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 TMEM176AQ96HP8 235 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 CEP295NLQ96MC4 621 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 HEXIM2Q96MH2 286 aaKnown RBP13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 CRISPLD1Q9H336 500 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 TSPY26PQ9H489 355 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 CBX8Q9HC52 389 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 UBE2TQ9NPD8 197 aaPredicted RBP13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 HMGXB4Q9UGU5 601 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 NR2E1Q9Y466 385 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 CLUHO75153 1309 aa13.91□□□□□ -0.18
ERGIC3-209ENST00000447986 LRRC10BA6NIK2 292 aa13.9□□□□□ -0.18
ERGIC3-209ENST00000447986 BMP1P13497 986 aa13.9□□□□□ -0.18
ERGIC3-209ENST00000447986 BDNFP23560 247 aa13.9□□□□□ -0.18
ERGIC3-209ENST00000447986 PON1P27169 355 aa13.9□□□□□ -0.18
ERGIC3-209ENST00000447986 FILIP1LQ4L180 1135 aa13.9□□□□□ -0.18
ERGIC3-209ENST00000447986 PABPC1LQ4VXU2 614 aaKnown RBP13.9□□□□□ -0.18
ERGIC3-209ENST00000447986 PHLDB3Q6NSJ2 640 aa13.9□□□□□ -0.18
ERGIC3-209ENST00000447986 PDZD4Q76G19 769 aaPredicted RBP13.9□□□□□ -0.18
ERGIC3-209ENST00000447986 CORO1BQ9BR76 489 aa13.9□□□□□ -0.18
ERGIC3-209ENST00000447986 POMKQ9H5K3 350 aa13.9□□□□□ -0.18
ERGIC3-209ENST00000447986 ASAH2Q9NR71 780 aa13.9□□□□□ -0.18
ERGIC3-209ENST00000447986 EHD2Q9NZN4 543 aa13.9□□□□□ -0.18
ERGIC3-209ENST00000447986 PCDHB4Q9Y5E5 795 aa13.9□□□□□ -0.18
ERGIC3-209ENST00000447986 ZNF197O14709 1029 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 SOAT2O75908 522 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 FGF19O95750 216 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 CSH1P0DML2 217 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 CSH2P0DML3 217 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 RFX1P22670 979 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 ORC1Q13415 861 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 CCDC142Q17RM4 750 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 TMEM270Q6UE05 265 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 LUZP1Q86V48 1076 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 ARHGEF19Q8IW93 802 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 WHAMMQ8TF30 809 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 PSMG2Q969U7 264 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 ACSF2Q96CM8 615 aaPredicted RBP13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 CYFIP2Q96F07 1278 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 SMARCD1Q96GM5 515 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 TWNKQ96RR1 684 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 HSD3B7Q9H2F3 369 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 FAM49BQ9NUQ9 324 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 CEP72Q9P209 647 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 DNMT3BQ9UBC3 853 aaKnown RBP13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 CDH22Q9UJ99 828 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 KIAA1257Q9ULG3 409 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 USTQ9Y2C2 406 aa13.9□□□□□ -0.19
ERGIC3-209ENST00000447986 LGALS16A8MUM7 142 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms