RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 NOMO3P69849 1222 aa20.69■□□□□ 0.9
SGCE-207ENST00000447873 DSG1Q02413 1049 aa20.69■□□□□ 0.9
SGCE-207ENST00000447873 PSMD5Q16401 504 aa20.69■□□□□ 0.9
SGCE-207ENST00000447873 ACAD10Q6JQN1 1059 aa20.69■□□□□ 0.9
SGCE-207ENST00000447873 KIAA1328Q86T90 577 aa20.69■□□□□ 0.9
SGCE-207ENST00000447873 LRRTM3Q86VH5 581 aa20.69■□□□□ 0.9
SGCE-207ENST00000447873 FUKQ8N0W3 1084 aa20.69■□□□□ 0.9
SGCE-207ENST00000447873 UBA3Q8TBC4 463 aa20.69■□□□□ 0.9
SGCE-207ENST00000447873 KIAA1524Q8TCG1 905 aa20.69■□□□□ 0.9
SGCE-207ENST00000447873 CPA5Q8WXQ8 436 aa20.69■□□□□ 0.9
SGCE-207ENST00000447873 PKMYT1Q99640 499 aa20.69■□□□□ 0.9
SGCE-207ENST00000447873 B3GNT5Q9BYG0 378 aa20.69■□□□□ 0.9
SGCE-207ENST00000447873 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.69■□□□□ 0.9
SGCE-207ENST00000447873 RANBP2P49792 3224 aaKnown RBP20.69■□□□□ 0.9
SGCE-207ENST00000447873 ZSCAN12O43309 604 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 RTN2O75298 545 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 FTLP02792 175 aaPredicted RBP20.68■□□□□ 0.9
SGCE-207ENST00000447873 OR4Q2P0C623 313 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 CDR1P51861 262 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 CENPCQ03188 943 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 SLC39A12Q504Y0 691 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 PPP1R2P3Q6NXS1 205 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 TDHQ8IZJ6 230 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 ANKRD52Q8NB46 1076 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 C1orf131Q8NDD1 294 aaKnown RBP20.68■□□□□ 0.9
SGCE-207ENST00000447873 MYLPFQ96A32 169 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 ISCUQ9H1K1 167 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 TMLHEQ9NVH6 421 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 MTRRQ9UBK8 725 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 MSRAQ9UJ68 235 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 MTUS1Q9ULD2 1270 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 YBX2Q9Y2T7 364 aaKnown RBP20.68■□□□□ 0.9
SGCE-207ENST00000447873 BACE2Q9Y5Z0 518 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 CLDN5O00501 218 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 TBC1D4O60343 1298 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 ARHGEF15O94989 841 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 RB1P06400 928 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 H2AFZP0C0S5 128 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 CDH5P33151 784 aaPredicted RBP20.68■□□□□ 0.9
SGCE-207ENST00000447873 PBX2P40425 430 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 VAV2P52735 878 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 BCAT1P54687 386 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 ARPP19P56211 112 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 SLC8A3P57103 927 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 NFE2Q16621 373 aaPredicted RBP20.68■□□□□ 0.9
SGCE-207ENST00000447873 C4orf50Q6ZRC1 276 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 H2AFVQ71UI9 128 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 ZSCAN30Q86W11 494 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 TTC30AQ86WT1 665 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 DNAAF5Q86Y56 855 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 TXLNBQ8N3L3 684 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 FBXO22Q8NEZ5 403 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 PBX4Q9BYU1 374 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 MRPL17Q9NRX2 175 aaKnown RBP20.68■□□□□ 0.9
SGCE-207ENST00000447873 CDY1Q9Y6F8 540 aa20.68■□□□□ 0.9
SGCE-207ENST00000447873 C5orf67F2Z3F1 127 aa20.67■□□□□ 0.9
SGCE-207ENST00000447873 CCP110O43303 1012 aa20.67■□□□□ 0.9
SGCE-207ENST00000447873 CPB1P15086 417 aa20.67■□□□□ 0.9
SGCE-207ENST00000447873 DNAJB2P25686 324 aa20.67■□□□□ 0.9
SGCE-207ENST00000447873 GPD2P43304 727 aa20.67■□□□□ 0.9
SGCE-207ENST00000447873 BST2Q10589 180 aaKnown RBP20.67■□□□□ 0.9
SGCE-207ENST00000447873 RAB30Q15771 203 aa20.67■□□□□ 0.9
SGCE-207ENST00000447873 RSPO2Q6UXX9 243 aaPredicted RBP20.67■□□□□ 0.9
SGCE-207ENST00000447873 PAQR9Q6ZVX9 377 aa20.67■□□□□ 0.9
SGCE-207ENST00000447873 FAM35AQ86V20 835 aa20.67■□□□□ 0.9
SGCE-207ENST00000447873 SPATA2LQ8IUW3 424 aaPredicted RBP20.67■□□□□ 0.9
SGCE-207ENST00000447873 WDTC1Q8N5D0 677 aa20.67■□□□□ 0.9
SGCE-207ENST00000447873 SECISBP2LQ93073 1101 aaKnown RBP20.67■□□□□ 0.9
SGCE-207ENST00000447873 SAMD11Q96NU1 681 aa20.67■□□□□ 0.9
SGCE-207ENST00000447873 NOX5Q96PH1 765 aa20.67■□□□□ 0.9
SGCE-207ENST00000447873 TGS1Q96RS0 853 aaKnown RBP20.67■□□□□ 0.9
SGCE-207ENST00000447873 DUSP16Q9BY84 665 aa20.67■□□□□ 0.9
SGCE-207ENST00000447873 ALG13Q9NP73 1137 aaKnown RBP20.67■□□□□ 0.9
SGCE-207ENST00000447873 TRMT1Q9NXH9 659 aaKnown RBP20.67■□□□□ 0.9
SGCE-207ENST00000447873 LZTS1Q9Y250 596 aa20.67■□□□□ 0.9
SGCE-207ENST00000447873 SSX2IPQ9Y2D8 614 aa20.67■□□□□ 0.9
SGCE-207ENST00000447873 ATP8B3O60423 1300 aa20.67■□□□□ 0.9
SGCE-207ENST00000447873 FAM200BP0CF97 657 aa20.66■□□□□ 0.9
SGCE-207ENST00000447873 PKDCCQ504Y2 493 aa20.66■□□□□ 0.9
SGCE-207ENST00000447873 SPRED2Q7Z698 418 aa20.66■□□□□ 0.9
SGCE-207ENST00000447873 CCAR2Q8N163 923 aaKnown RBP20.66■□□□□ 0.9
SGCE-207ENST00000447873 SMARCD1Q96GM5 515 aa20.66■□□□□ 0.9
SGCE-207ENST00000447873 C11orf84Q9BUA3 381 aaPredicted RBP20.66■□□□□ 0.9
SGCE-207ENST00000447873 PACSIN1Q9BY11 444 aa20.66■□□□□ 0.9
SGCE-207ENST00000447873 ZBP1Q9H171 429 aa20.66■□□□□ 0.9
SGCE-207ENST00000447873 KRT82Q9NSB4 513 aa20.66■□□□□ 0.9
SGCE-207ENST00000447873 PTPRDP23468 1912 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 SETSIPP0DME0 302 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 CTSAP10619 480 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 NPR3P17342 541 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 RPL17P18621 184 aaKnown RBP20.65■□□□□ 0.9
SGCE-207ENST00000447873 ABCB4P21439 1286 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 MSNP26038 577 aaKnown RBP20.65■□□□□ 0.9
SGCE-207ENST00000447873 OR1D2P34982 312 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 CA8P35219 290 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 GALCP54803 685 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 TAP1Q03518 808 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 PDE4CQ08493 712 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 KIF5AQ12840 1032 aa20.65■□□□□ 0.9
SGCE-207ENST00000447873 GPR17Q13304 367 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms