RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 PARP6Q2NL67 630 aa12.06□□□□□ -0.48
GNE-203ENST00000447283 LIN9Q5TKA1 542 aa12.06□□□□□ -0.48
GNE-203ENST00000447283 TRIM72Q6ZMU5 477 aa12.06□□□□□ -0.48
GNE-203ENST00000447283 ANKS1BQ7Z6G8 1248 aa12.06□□□□□ -0.48
GNE-203ENST00000447283 TLK2Q86UE8 772 aa12.06□□□□□ -0.48
GNE-203ENST00000447283 SLC7A3Q8WY07 619 aa12.06□□□□□ -0.48
GNE-203ENST00000447283 BSNDQ8WZ55 320 aa12.06□□□□□ -0.48
GNE-203ENST00000447283 ELMO3Q96BJ8 720 aa12.06□□□□□ -0.48
GNE-203ENST00000447283 THOC1Q96FV9 657 aaKnown RBP12.06□□□□□ -0.48
GNE-203ENST00000447283 VCPIP1Q96JH7 1222 aa12.06□□□□□ -0.48
GNE-203ENST00000447283 TTC25Q96NG3 672 aa12.06□□□□□ -0.48
GNE-203ENST00000447283 RAB3IPQ96QF0 476 aaPredicted RBP12.06□□□□□ -0.48
GNE-203ENST00000447283 ADAM22Q9P0K1 906 aa12.06□□□□□ -0.48
GNE-203ENST00000447283 TRIM33Q9UPN9 1127 aa12.06□□□□□ -0.48
GNE-203ENST00000447283 A6NJR5 290 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 HBP1O60381 514 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 MMP3P08254 477 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 AKR1A1P14550 325 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 GCAP28676 217 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 RFC5P40937 340 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 ATP11AP98196 1134 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 TMED2Q15363 201 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 CCDC142Q17RM4 750 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 BRDTQ58F21 947 aaPredicted RBP12.05□□□□□ -0.48
GNE-203ENST00000447283 PLEKHA7Q6IQ23 1121 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 LLGL2Q6P1M3 1020 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 DRICH1Q6PGQ1 229 aaPredicted RBP12.05□□□□□ -0.48
GNE-203ENST00000447283 EXOC8Q8IYI6 725 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 BEGAINQ9BUH8 593 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 AP5M1Q9H0R1 490 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 DHX33Q9H6R0 707 aaKnown RBP12.05□□□□□ -0.48
GNE-203ENST00000447283 MRPL47Q9HD33 250 aaKnown RBP12.05□□□□□ -0.48
GNE-203ENST00000447283 STK38LQ9Y2H1 464 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 MGAMO43451 1857 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 EXOC1LA0A1B0GW35 172 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 H3BRB1 525 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 DNALI1O14645 258 aaPredicted RBP12.05□□□□□ -0.48
GNE-203ENST00000447283 HOXD8P13378 290 aaPredicted RBP12.05□□□□□ -0.48
GNE-203ENST00000447283 NOMO3P69849 1222 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 MAMLD1Q13495 774 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 NAA25Q14CX7 972 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 P3H1Q32P28 736 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 DAB2IPQ5VWQ8 1189 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 PHLDB2Q86SQ0 1253 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 ERICH1Q86X53 443 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 ZNF296Q8WUU4 475 aaPredicted RBP12.05□□□□□ -0.48
GNE-203ENST00000447283 ZNF516Q92618 1163 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 ZNF570Q96NI8 536 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 C16orf70Q9BSU1 422 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 LRMDAQ9H2I8 198 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 RNPEPQ9H4A4 650 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 TUT1Q9H6E5 874 aaKnown RBP12.05□□□□□ -0.48
GNE-203ENST00000447283 ETNK1Q9HBU6 452 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 XPNPEP1Q9NQW7 623 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 SENP1Q9P0U3 644 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 SMG5Q9UPR3 1016 aaKnown RBP12.05□□□□□ -0.48
GNE-203ENST00000447283 USH1CQ9Y6N9 552 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 SCINQ9Y6U3 715 aa12.05□□□□□ -0.48
GNE-203ENST00000447283 MYH9P35579 1960 aaKnown RBP12.05□□□□□ -0.48
GNE-203ENST00000447283 LIASO43766 372 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 DIAPH2O60879 1101 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 CYBAP13498 195 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 EMC2Q15006 297 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 SETDB1Q15047 1291 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 RASA2Q15283 850 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 ZACNQ401N2 412 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 WDR44Q5JSH3 913 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 PPP1R2P3Q6NXS1 205 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 FAM47EQ6ZV65 393 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 PHF13Q86YI8 300 aaPredicted RBP12.04□□□□□ -0.48
GNE-203ENST00000447283 TRPV1Q8NER1 839 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 RAET1EQ8TD07 263 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 UTP4Q969X6 686 aaKnown RBP12.04□□□□□ -0.48
GNE-203ENST00000447283 ANKRD27Q96NW4 1050 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 FAM118BQ9BPY3 351 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 MYLK2Q9H1R3 596 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 PPCSQ9HAB8 311 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 SAYSD1Q9NPB0 183 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 KCNG1Q9UIX4 513 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 PHTF1Q9UMS5 762 aa12.04□□□□□ -0.48
GNE-203ENST00000447283 HNRNPDLO14979 420 aaKnown RBP12.03□□□□□ -0.48
GNE-203ENST00000447283 ADCY3O60266 1144 aa12.03□□□□□ -0.48
GNE-203ENST00000447283 DUSP11O75319 330 aaKnown RBP12.03□□□□□ -0.48
GNE-203ENST00000447283 MAFO75444 373 aaPredicted RBP12.03□□□□□ -0.48
GNE-203ENST00000447283 ZNF286BP0CG31 522 aa12.03□□□□□ -0.48
GNE-203ENST00000447283 ATP2A2P16615 1042 aaKnown RBP12.03□□□□□ -0.48
GNE-203ENST00000447283 ACO1P21399 889 aaKnown RBP12.03□□□□□ -0.48
GNE-203ENST00000447283 CETN2P41208 172 aa12.03□□□□□ -0.48
GNE-203ENST00000447283 CPT1AP50416 773 aa12.03□□□□□ -0.48
GNE-203ENST00000447283 SOX10P56693 466 aa12.03□□□□□ -0.48
GNE-203ENST00000447283 RTP1P59025 263 aa12.03□□□□□ -0.48
GNE-203ENST00000447283 CACNB2Q08289 660 aaPredicted RBP12.03□□□□□ -0.48
GNE-203ENST00000447283 ADCY1Q08828 1119 aa12.03□□□□□ -0.48
GNE-203ENST00000447283 NFX1Q12986 1120 aaKnown RBP12.03□□□□□ -0.48
GNE-203ENST00000447283 SPARCL1Q14515 664 aa12.03□□□□□ -0.48
GNE-203ENST00000447283 PSMD6Q15008 389 aa12.03□□□□□ -0.48
GNE-203ENST00000447283 PDK4Q16654 411 aa12.03□□□□□ -0.48
GNE-203ENST00000447283 C2CD6Q53TS8 623 aa12.03□□□□□ -0.48
GNE-203ENST00000447283 SPDYAQ5MJ70 313 aa12.03□□□□□ -0.48
GNE-203ENST00000447283 GSTA5Q7RTV2 222 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms