RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SPATA31D3P0C874 917 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 CYP11B1P15538 503 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 PDE6CP51160 858 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 BPIFB4P59827 614 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 RAB33AQ14088 237 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 PTPROQ16827 1216 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 GOLGA7BQ2TAP0 167 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 SPATA31D4Q6ZUB0 917 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 PAQR9Q6ZVX9 377 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 RBM23Q86U06 439 aaKnown RBP19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 FUKQ8N0W3 1084 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 TTC9BQ8N6N2 239 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 ATAD1Q8NBU5 361 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 EPS8L1Q8TE68 723 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 ZNF606Q8WXB4 792 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 ZNF518BQ9C0D4 1074 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 NOCTQ9UK39 431 aaKnown RBP19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 GREB1Q4ZG55 1949 aa19.1■□□□□ 0.65
TRAPPC4-203ENST00000447216 DOCK6Q96HP0 2047 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 O00370 1275 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 CLASP2O75122 1294 aaKnown RBP19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 ADH1AP07327 375 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 CHRNB2P17787 502 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 BDNFP23560 247 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 ADCY1Q08828 1119 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 KLHL30Q0D2K2 578 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 ADGRE1Q14246 886 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 MAPRE1Q15691 268 aaKnown RBP19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 HGSNATQ68CP4 663 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 ARHGAP17Q68EM7 881 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 WDR59Q6PJI9 974 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 Q7L0L9 218 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 FAM35AQ86V20 835 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 SPATA2LQ8IUW3 424 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 DDX1Q92499 740 aaKnown RBP19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 SYN2Q92777 582 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 HNRNPABQ99729 332 aaKnown RBP19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 CRISPLD1Q9H336 500 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 HAUS4Q9H6D7 363 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 KIAA1257Q9ULG3 409 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 PCDHB5Q9Y5E4 795 aa19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 ZNF638Q14966 1978 aaKnown RBP19.09■□□□□ 0.65
TRAPPC4-203ENST00000447216 CDH23Q9H251 3354 aa19.08■□□□□ 0.65
TRAPPC4-203ENST00000447216 FAM170AA1A519 330 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 GOLGA6L6A8MZA4 724 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 TGM5O43548 720 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 MICAL2O94851 1124 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 ABLIM3O94929 683 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 SEC24AO95486 1093 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 MMEP08473 750 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 PLEKP08567 350 aaPredicted RBP19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 CYP2F1P24903 491 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 HNRNPH3P31942 346 aaKnown RBP19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 PRKCIP41743 596 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 NRIP1P48552 1158 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 CACNA2D1P54289 1103 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 CNGA2Q16280 664 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 NFE2Q16621 373 aaPredicted RBP19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 TSR1Q2NL82 804 aaKnown RBP19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 TDRD12Q587J7 1177 aaKnown RBP19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 SMYD5Q6GMV2 418 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 DENND1BQ6P3S1 775 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 C4orf50Q6ZRC1 276 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 CCDC186Q7Z3E2 898 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 UBA3Q8TBC4 463 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 PDLIM2Q96JY6 352 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 TLE6Q9H808 572 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 TMEM30AQ9NV96 361 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 AFF4Q9UHB7 1163 aaKnown RBP19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 TSPAN16Q9UKR8 245 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 SLC27A5Q9Y2P5 690 aa19.08■□□□□ 0.64
TRAPPC4-203ENST00000447216 M0QYV0 167 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 AP1G2O75843 785 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 SOAT2O75908 522 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 SERPING1P05155 500 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 CCDC172P0C7W6 258 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 GTF2F1P35269 517 aaKnown RBP eCLIP19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 FMO1Q01740 532 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 DUSP4Q13115 394 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 TPGS2Q68CL5 300 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 LCLAT1Q6UWP7 414 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 ZNF571Q7Z3V5 609 aaPredicted RBP19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 TTC30AQ86WT1 665 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 PASD1Q8IV76 773 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 FMNL3Q8IVF7 1028 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 ZNF461Q8TAF7 563 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 OLIG1Q8TAK6 271 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 CHP1Q99653 195 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 AGPAT1Q99943 283 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 KRT82Q9NSB4 513 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 ZNHIT6Q9NWK9 470 aaKnown RBP19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 ARHGAP20Q9P2F6 1191 aa19.07■□□□□ 0.64
TRAPPC4-203ENST00000447216 ATP8B3O60423 1300 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 MYO16Q9Y6X6 1858 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 MED7O43513 233 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 GLUD1P00367 558 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 EPCAMP16422 314 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 IGFBP4P22692 258 aa19.06■□□□□ 0.64
TRAPPC4-203ENST00000447216 GPR15P49685 360 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms