RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 YIPF2Q9BWQ6 316 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 MAN1C1Q9NR34 630 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 TBC1D13Q9NVG8 400 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 TTC26A0AVF1 554 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 RASSF10A6NK89 507 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 CA12O43570 354 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 ATP9BO43861 1147 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 KLRC1P26715 233 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 GCKP35557 465 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 ZNF200P98182 395 aaPredicted RBP8.9□□□□□ -0.99
PTPN3-204ENST00000446349 CATSPER3Q86XQ3 398 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 TTC30BQ8N4P2 665 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 ZC3H7BQ9UGR2 993 aaKnown RBP8.9□□□□□ -0.99
PTPN3-204ENST00000446349 SLC39A10Q9ULF5 831 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 CFLARO15519 480 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 TRPA1O75762 1119 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 HOXB8P17481 243 aaPredicted RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 ERVK-9P63128 1117 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 ERVK-24P63145 666 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 TTC39BQ5VTQ0 682 aaPredicted RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 MAGEC3Q8TD91 643 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 RTFDC1Q9BY42 306 aaPredicted RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 PSMC3IPQ9P2W1 217 aaPredicted RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 GRID1Q9ULK0 1009 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 FHOD1Q9Y613 1164 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 A0A1B0GTH6 734 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 CFAP73A6NFT4 308 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 VWA5AO00534 786 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 IRF1P10914 325 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 MYL2P10916 166 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 GZMAP12544 262 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 KLRC2P26717 231 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 GUCY1A2P33402 732 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 HIRAP54198 1017 aaPredicted RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 ATXN3P54252 364 aaPredicted RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 ACAP1Q15027 740 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 SGSM3Q96HU1 749 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 RBBP8Q99708 897 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 FAM167BQ9BTA0 163 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 MRPL46Q9H2W6 279 aaKnown RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 PDGFCQ9NRA1 345 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 AGPAT3Q9NRZ7 376 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 XPO7Q9UIA9 1087 aaKnown RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 ZFP69BQ9UJL9 534 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 DIAPH2O60879 1101 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 KRT8P05787 483 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 VCPP55072 806 aaKnown RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 PPP2R2AP63151 447 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 CNTN1Q12860 1018 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 BTG3Q14201 252 aaPredicted RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 RASIP1Q5U651 963 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 POTEAQ6S8J7 498 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 ANO5Q75V66 913 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 RIOX2Q8IUF8 465 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 ZKSCAN4Q969J2 545 aaPredicted RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 TARS2Q9BW92 718 aaKnown RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 GTF3C4Q9UKN8 822 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 GAKO14976 1311 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 IFRD1O00458 451 aaPredicted RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 MSH4O15457 936 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 TIMM44O43615 452 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 KLHL2O95198 593 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 AGTP01019 485 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 CYP2C18P33260 490 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 GUCA1AP43080 201 aaPredicted RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 PTGER2P43116 358 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 DEFB115Q30KQ5 88 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 KBTBD12Q3ZCT8 623 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 SLC27A1Q6PCB7 646 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 PPP1R16AQ96I34 528 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 STOML1Q9UBI4 398 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 CYP2A6P11509 494 aaPredicted RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 HSPA9P38646 679 aaKnown RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 MAPK8P45983 427 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 ARFIP2P53365 341 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 BST2Q10589 180 aaKnown RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 GRIK4Q16099 956 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 FSCN1Q16658 493 aaKnown RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 SPDYAQ5MJ70 313 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 RARS2Q5T160 578 aaKnown RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 SPIRE2Q8WWL2 714 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 RIOX1Q9H6W3 641 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 AHSPQ9NZD4 102 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 MAPRE3Q9UPY8 281 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 MYMKA6NI61 221 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 KRT4P19013 534 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 EEF1DP29692 281 aaKnown RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 CAMK2GQ13555 558 aaPredicted RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 MFSD10Q14728 455 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 FBXO47Q5MNV8 452 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 LMBRD2Q68DH5 695 aaPredicted RBP8.89□□□□□ -0.99
PTPN3-204ENST00000446349 LRIG3Q6UXM1 1119 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 SNX31Q8N9S9 440 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 SLC35G2Q8TBE7 412 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 SMARCD1Q96GM5 515 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 ERGIC2Q96RQ1 377 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 OSBPL8Q9BZF1 889 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 CD274Q9NZQ7 290 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 ITGALP20701 1170 aa8.89□□□□□ -0.99
PTPN3-204ENST00000446349 SLCO1A2P46721 670 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms